Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families.
<h4>Background</h4>Syndactyly type 1 (SD1) is an autosomal dominant limb malformation characterized in its classical form by complete or partial webbing between the third and fourth fingers and/or the second and third toes. Its four subtypes (a, b, c, and d) are defined based on variable...
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Public Library of Science (PLoS)
2014-01-01
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| author | Limeng Dai Dan Liu Min Song Xueqing Xu Gang Xiong Kang Yang Kun Zhang Hui Meng Hong Guo Yun Bai |
| author_facet | Limeng Dai Dan Liu Min Song Xueqing Xu Gang Xiong Kang Yang Kun Zhang Hui Meng Hong Guo Yun Bai |
| author_sort | Limeng Dai |
| collection | DOAJ |
| description | <h4>Background</h4>Syndactyly type 1 (SD1) is an autosomal dominant limb malformation characterized in its classical form by complete or partial webbing between the third and fourth fingers and/or the second and third toes. Its four subtypes (a, b, c, and d) are defined based on variable phenotypes, but the responsible gene is yet to be identified. SD1-a has been mapped to chromosome 3p21.31 and SD1-b to 2q34-q36. SD1-c and SD1-d are very rare and, to our knowledge, no gene loci have been identified.<h4>Methods and results</h4>In two Chinese families with SD1-c, linkage and haplotype analyses mapped the disease locus to 2q31-2q32. Copy number variation (CNV) analysis, using array-based comparative genomic hybridization (array CGH), excluded the possibility of microdeletion or microduplication. Sequence analyses of related syndactyly genes in this region identified c.917G>A (p.R306Q) in the homeodomain of HOXD13 in family A. Analysis on family B identified the mutation c.916C>G (p.R306G) and therefore confirmed the genetic homogeneity. Luciferase assays indicated that these two mutations affected the transcriptional activation ability of HOXD13. The spectrum of HOXD13 mutations suggested a close genotype-phenotype correlation between the different types of HOXD13-Syndactyly. Overlaps of the various phenotypes were found both among and within families carrying the HOXD13 mutation.<h4>Conclusions</h4>Mutations (p.R306Q and p.R306G) in the homeodomain of HOXD13 cause SD1-c. There are affinities between SD1-c and synpolydactyly. Different limb malformations due to distinct classes of HOXD13 mutations should be considered as a continuum of phenotypes and further classification of syndactyly should be done based on phenotype and genotype. |
| format | Article |
| id | doaj-art-77e00f287e0c41418a13ecbc034406ee |
| institution | OA Journals |
| issn | 1932-6203 |
| language | English |
| publishDate | 2014-01-01 |
| publisher | Public Library of Science (PLoS) |
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| spelling | doaj-art-77e00f287e0c41418a13ecbc034406ee2025-08-20T02:14:51ZengPublic Library of Science (PLoS)PLoS ONE1932-62032014-01-0195e9619210.1371/journal.pone.0096192Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families.Limeng DaiDan LiuMin SongXueqing XuGang XiongKang YangKun ZhangHui MengHong GuoYun Bai<h4>Background</h4>Syndactyly type 1 (SD1) is an autosomal dominant limb malformation characterized in its classical form by complete or partial webbing between the third and fourth fingers and/or the second and third toes. Its four subtypes (a, b, c, and d) are defined based on variable phenotypes, but the responsible gene is yet to be identified. SD1-a has been mapped to chromosome 3p21.31 and SD1-b to 2q34-q36. SD1-c and SD1-d are very rare and, to our knowledge, no gene loci have been identified.<h4>Methods and results</h4>In two Chinese families with SD1-c, linkage and haplotype analyses mapped the disease locus to 2q31-2q32. Copy number variation (CNV) analysis, using array-based comparative genomic hybridization (array CGH), excluded the possibility of microdeletion or microduplication. Sequence analyses of related syndactyly genes in this region identified c.917G>A (p.R306Q) in the homeodomain of HOXD13 in family A. Analysis on family B identified the mutation c.916C>G (p.R306G) and therefore confirmed the genetic homogeneity. Luciferase assays indicated that these two mutations affected the transcriptional activation ability of HOXD13. The spectrum of HOXD13 mutations suggested a close genotype-phenotype correlation between the different types of HOXD13-Syndactyly. Overlaps of the various phenotypes were found both among and within families carrying the HOXD13 mutation.<h4>Conclusions</h4>Mutations (p.R306Q and p.R306G) in the homeodomain of HOXD13 cause SD1-c. There are affinities between SD1-c and synpolydactyly. Different limb malformations due to distinct classes of HOXD13 mutations should be considered as a continuum of phenotypes and further classification of syndactyly should be done based on phenotype and genotype.https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0096192&type=printable |
| spellingShingle | Limeng Dai Dan Liu Min Song Xueqing Xu Gang Xiong Kang Yang Kun Zhang Hui Meng Hong Guo Yun Bai Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. PLoS ONE |
| title | Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. |
| title_full | Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. |
| title_fullStr | Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. |
| title_full_unstemmed | Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. |
| title_short | Mutations in the homeodomain of HOXD13 cause syndactyly type 1-c in two Chinese families. |
| title_sort | mutations in the homeodomain of hoxd13 cause syndactyly type 1 c in two chinese families |
| url | https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0096192&type=printable |
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