FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks

Predicting stochastic spreading processes across large-scale multi-layered networks remains a significant computational challenge due to the intricate interplay between network structure and spread dynamics. This study introduces FastGEMF, a novel, scalable simulation framework for exact, high-speed...

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Main Authors: Mohammad Hossein Samaei, Faryad Darabi Sahneh, Caterina Scoglio
Format: Article
Language:English
Published: IEEE 2025-01-01
Series:IEEE Access
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Online Access:https://ieeexplore.ieee.org/document/10876117/
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author Mohammad Hossein Samaei
Faryad Darabi Sahneh
Caterina Scoglio
author_facet Mohammad Hossein Samaei
Faryad Darabi Sahneh
Caterina Scoglio
author_sort Mohammad Hossein Samaei
collection DOAJ
description Predicting stochastic spreading processes across large-scale multi-layered networks remains a significant computational challenge due to the intricate interplay between network structure and spread dynamics. This study introduces FastGEMF, a novel, scalable simulation framework for exact, high-speed modeling of Markov chain processes on complex multi-layer networks. Inspired by the Gillespie algorithm and optimized for efficiency, FastGEMF achieves logarithmic time complexity per event, enabling simulations on networks with millions of nodes and edges without sacrificing accuracy. It introduces an event-driven algorithm with cautious update strategies, supporting diverse multi-compartment spreading processes. FastGEMF is implemented in Python programming language as an open-source package, providing accessibility to researchers and practitioners across domains such as epidemiology, cybersecurity, and information propagation, establishing an exact baseline for model validation and comparative analysis.
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publishDate 2025-01-01
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spelling doaj-art-769d7e4d61dd4e3b8e7f21d9458bdfa12025-08-20T02:15:25ZengIEEEIEEE Access2169-35362025-01-0113271122712510.1109/ACCESS.2025.353934510876117FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer NetworksMohammad Hossein Samaei0https://orcid.org/0000-0003-4240-1083Faryad Darabi Sahneh1Caterina Scoglio2https://orcid.org/0000-0003-4486-9229Department of Electrical and Computer Engineering, College of Engineering, Kansas State University, Manhattan, KS, USADepartment of Mathematics, The University of Arizona, Tucson, AZ, USADepartment of Electrical and Computer Engineering, College of Engineering, Kansas State University, Manhattan, KS, USAPredicting stochastic spreading processes across large-scale multi-layered networks remains a significant computational challenge due to the intricate interplay between network structure and spread dynamics. This study introduces FastGEMF, a novel, scalable simulation framework for exact, high-speed modeling of Markov chain processes on complex multi-layer networks. Inspired by the Gillespie algorithm and optimized for efficiency, FastGEMF achieves logarithmic time complexity per event, enabling simulations on networks with millions of nodes and edges without sacrificing accuracy. It introduces an event-driven algorithm with cautious update strategies, supporting diverse multi-compartment spreading processes. FastGEMF is implemented in Python programming language as an open-source package, providing accessibility to researchers and practitioners across domains such as epidemiology, cybersecurity, and information propagation, establishing an exact baseline for model validation and comparative analysis.https://ieeexplore.ieee.org/document/10876117/Complex networksMarkov processepidemic spreadingmechanistic modelssimulation
spellingShingle Mohammad Hossein Samaei
Faryad Darabi Sahneh
Caterina Scoglio
FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks
IEEE Access
Complex networks
Markov process
epidemic spreading
mechanistic models
simulation
title FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks
title_full FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks
title_fullStr FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks
title_full_unstemmed FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks
title_short FastGEMF: Scalable High-Speed Simulation of Stochastic Spreading Processes Over Complex Multilayer Networks
title_sort fastgemf scalable high speed simulation of stochastic spreading processes over complex multilayer networks
topic Complex networks
Markov process
epidemic spreading
mechanistic models
simulation
url https://ieeexplore.ieee.org/document/10876117/
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AT faryaddarabisahneh fastgemfscalablehighspeedsimulationofstochasticspreadingprocessesovercomplexmultilayernetworks
AT caterinascoglio fastgemfscalablehighspeedsimulationofstochasticspreadingprocessesovercomplexmultilayernetworks