Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries

The red-flowered strawberry is a novel ornamental plant. This study aimed to assess the genetic diversity among ornamental strawberry germplasm resources. In this investigation, 17 red-flowered strawberry germplasms and 1 white-flowered strawberry germplasm were analyzed for genetic diversity and ge...

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Main Authors: Chaocui Nong, Jiayi Hou, Jin He, Yanju Zheng, Shugen Yang, Lai Jiang, Qian Xie, Wei Wang, Jinghua Wu, Qingxi Chen, Lixiang Miao
Format: Article
Language:English
Published: MDPI AG 2024-12-01
Series:Horticulturae
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Online Access:https://www.mdpi.com/2311-7524/10/12/1364
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author Chaocui Nong
Jiayi Hou
Jin He
Yanju Zheng
Shugen Yang
Lai Jiang
Qian Xie
Wei Wang
Jinghua Wu
Qingxi Chen
Lixiang Miao
author_facet Chaocui Nong
Jiayi Hou
Jin He
Yanju Zheng
Shugen Yang
Lai Jiang
Qian Xie
Wei Wang
Jinghua Wu
Qingxi Chen
Lixiang Miao
author_sort Chaocui Nong
collection DOAJ
description The red-flowered strawberry is a novel ornamental plant. This study aimed to assess the genetic diversity among ornamental strawberry germplasm resources. In this investigation, 17 red-flowered strawberry germplasms and 1 white-flowered strawberry germplasm were analyzed for genetic diversity and genetic relationships using a combination of phenotypic data, inter-simple sequence repeats (ISSR), and conserved DNA-derived polymorphism (CDDP) molecular markers. The results indicated that the 18 strawberry germplasms exhibited significant variability and genetic diversity at both phenotypic and molecular levels. The clustering results revealed notable differences between phenotypic clustering and molecular marker clustering, while the ISSR and CDDP markers grouped into broadly similar clusters. We further consolidated the ISSR and CDDP marker data to conduct the cluster analysis and population structure analysis of the 18 strawberry germplasms. The cluster analysis classified these germplasms into four clusters at a genetic similarity coefficient of 0.77. The population structure analysis categorized the germplasms into three groups, with 88.89% exhibiting a Q value ≥ 0.6, and 11.11% demonstrating a Q value < 0.6. This finding suggests that the genetic background of the 18 strawberry germplasms is relatively homogeneous. Notably, ‘Summer Breeze-Rose’ and ‘Summer Breeze-Cherry’ possess relatively complex genetic backgrounds (Q < 0.6). Furthermore, the floral, foliar, and plant traits of both germplasms display significant ornamental value and can serve as vital resources for the development and utilization of ornamental strawberries, as well as for the selection and breeding of new varieties.
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spelling doaj-art-72aa45e9163d452aa78179dbcf98fa9e2025-08-20T02:00:23ZengMDPI AGHorticulturae2311-75242024-12-011012136410.3390/horticulturae10121364Phenotypic and Genetic Diversity Analysis of 18 Ornamental StrawberriesChaocui Nong0Jiayi Hou1Jin He2Yanju Zheng3Shugen Yang4Lai Jiang5Qian Xie6Wei Wang7Jinghua Wu8Qingxi Chen9Lixiang Miao10College of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaCollege of Horticulture, Fujian Agriculture and Forestry University, Fuzhou 350002, ChinaThe red-flowered strawberry is a novel ornamental plant. This study aimed to assess the genetic diversity among ornamental strawberry germplasm resources. In this investigation, 17 red-flowered strawberry germplasms and 1 white-flowered strawberry germplasm were analyzed for genetic diversity and genetic relationships using a combination of phenotypic data, inter-simple sequence repeats (ISSR), and conserved DNA-derived polymorphism (CDDP) molecular markers. The results indicated that the 18 strawberry germplasms exhibited significant variability and genetic diversity at both phenotypic and molecular levels. The clustering results revealed notable differences between phenotypic clustering and molecular marker clustering, while the ISSR and CDDP markers grouped into broadly similar clusters. We further consolidated the ISSR and CDDP marker data to conduct the cluster analysis and population structure analysis of the 18 strawberry germplasms. The cluster analysis classified these germplasms into four clusters at a genetic similarity coefficient of 0.77. The population structure analysis categorized the germplasms into three groups, with 88.89% exhibiting a Q value ≥ 0.6, and 11.11% demonstrating a Q value < 0.6. This finding suggests that the genetic background of the 18 strawberry germplasms is relatively homogeneous. Notably, ‘Summer Breeze-Rose’ and ‘Summer Breeze-Cherry’ possess relatively complex genetic backgrounds (Q < 0.6). Furthermore, the floral, foliar, and plant traits of both germplasms display significant ornamental value and can serve as vital resources for the development and utilization of ornamental strawberries, as well as for the selection and breeding of new varieties.https://www.mdpi.com/2311-7524/10/12/1364red-flowered strawberryphenotypic traitISSRCDDPgenetic diversitypopulation structure
spellingShingle Chaocui Nong
Jiayi Hou
Jin He
Yanju Zheng
Shugen Yang
Lai Jiang
Qian Xie
Wei Wang
Jinghua Wu
Qingxi Chen
Lixiang Miao
Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries
Horticulturae
red-flowered strawberry
phenotypic trait
ISSR
CDDP
genetic diversity
population structure
title Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries
title_full Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries
title_fullStr Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries
title_full_unstemmed Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries
title_short Phenotypic and Genetic Diversity Analysis of 18 Ornamental Strawberries
title_sort phenotypic and genetic diversity analysis of 18 ornamental strawberries
topic red-flowered strawberry
phenotypic trait
ISSR
CDDP
genetic diversity
population structure
url https://www.mdpi.com/2311-7524/10/12/1364
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