Bioinformatics methods for high-throughput DNA sequencing data
DNA sequence data generated by high-throughput sequencing technology is short in length, and the amount of data is enormous. The challenges and opportunities of the big data in high-throughput sequencing environment were analyzed. The data compression, the assembly of metagenomic sequence data, and...
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| Format: | Article |
| Language: | zho |
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China InfoCom Media Group
2016-03-01
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| Series: | 大数据 |
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| Online Access: | http://www.j-bigdataresearch.com.cn/thesisDetails#10.11959/j.issn.2096-0271.2016021 |
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| author | xiaojuan Zhan dengju Yao huaiqiu Zhu |
| author_facet | xiaojuan Zhan dengju Yao huaiqiu Zhu |
| author_sort | xiaojuan Zhan |
| collection | DOAJ |
| description | DNA sequence data generated by high-throughput sequencing technology is short in length, and the amount of data is enormous. The challenges and opportunities of the big data in high-throughput sequencing environment were analyzed. The data compression, the assembly of metagenomic sequence data, and algorithms and tools of metagenomic sequence data analysis also were summarized and discussed. Finally, the future of the study on short read DNA sequence data in high-throughput sequencing environment was discussed. |
| format | Article |
| id | doaj-art-709d323e9b3f4b0db9a3cb090e939dea |
| institution | OA Journals |
| issn | 2096-0271 |
| language | zho |
| publishDate | 2016-03-01 |
| publisher | China InfoCom Media Group |
| record_format | Article |
| series | 大数据 |
| spelling | doaj-art-709d323e9b3f4b0db9a3cb090e939dea2025-08-20T02:09:21ZzhoChina InfoCom Media Group大数据2096-02712016-03-012768759524271Bioinformatics methods for high-throughput DNA sequencing dataxiaojuan Zhandengju Yaohuaiqiu ZhuDNA sequence data generated by high-throughput sequencing technology is short in length, and the amount of data is enormous. The challenges and opportunities of the big data in high-throughput sequencing environment were analyzed. The data compression, the assembly of metagenomic sequence data, and algorithms and tools of metagenomic sequence data analysis also were summarized and discussed. Finally, the future of the study on short read DNA sequence data in high-throughput sequencing environment was discussed.http://www.j-bigdataresearch.com.cn/thesisDetails#10.11959/j.issn.2096-0271.2016021high-throughput DNA sequencing;bioinformatics;short read sequence data compression;short read sequence data splicing;short read sequence data analysis |
| spellingShingle | xiaojuan Zhan dengju Yao huaiqiu Zhu Bioinformatics methods for high-throughput DNA sequencing data 大数据 high-throughput DNA sequencing;bioinformatics;short read sequence data compression;short read sequence data splicing;short read sequence data analysis |
| title | Bioinformatics methods for high-throughput DNA sequencing data |
| title_full | Bioinformatics methods for high-throughput DNA sequencing data |
| title_fullStr | Bioinformatics methods for high-throughput DNA sequencing data |
| title_full_unstemmed | Bioinformatics methods for high-throughput DNA sequencing data |
| title_short | Bioinformatics methods for high-throughput DNA sequencing data |
| title_sort | bioinformatics methods for high throughput dna sequencing data |
| topic | high-throughput DNA sequencing;bioinformatics;short read sequence data compression;short read sequence data splicing;short read sequence data analysis |
| url | http://www.j-bigdataresearch.com.cn/thesisDetails#10.11959/j.issn.2096-0271.2016021 |
| work_keys_str_mv | AT xiaojuanzhan bioinformaticsmethodsforhighthroughputdnasequencingdata AT dengjuyao bioinformaticsmethodsforhighthroughputdnasequencingdata AT huaiqiuzhu bioinformaticsmethodsforhighthroughputdnasequencingdata |