Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors

Marine, and more recently, freshwater sponges are known to harbor unique microbial symbiotic communities relative to the surrounding water; however, our understanding of the microbial ecology and diversity of freshwater sponges is vastly limited compared to those of marine sponges. Here we analyzed...

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Main Authors: Jacqueline G. Keleher, Taylor A. Strope, Noah E. Estrada, Allison M. Griggs Mathis, Cole G. Easson, Cara Fiore
Format: Article
Language:English
Published: PeerJ Inc. 2025-01-01
Series:PeerJ
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Online Access:https://peerj.com/articles/18807.pdf
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author Jacqueline G. Keleher
Taylor A. Strope
Noah E. Estrada
Allison M. Griggs Mathis
Cole G. Easson
Cara Fiore
author_facet Jacqueline G. Keleher
Taylor A. Strope
Noah E. Estrada
Allison M. Griggs Mathis
Cole G. Easson
Cara Fiore
author_sort Jacqueline G. Keleher
collection DOAJ
description Marine, and more recently, freshwater sponges are known to harbor unique microbial symbiotic communities relative to the surrounding water; however, our understanding of the microbial ecology and diversity of freshwater sponges is vastly limited compared to those of marine sponges. Here we analyzed the microbiomes of three freshwater sponge species: Radiospongilla crateriformis, Eunapius fragilis, and Trochospongilla horrida, across four sites in western North Carolina, U.S.A. Our results support recent work indicating that freshwater sponges indeed harbor a distinct microbiome composition compared to the surrounding water and that these varied across sampling site indicating both environmental and host factors in shaping this distinct community. We also sampled sponges at one site over 3 months and observed that divergence in the microbial community between sponge and water occurs at least several weeks after sponges emerge for the growing season and that sponges maintain a distinct community from the water as the sponge tissue degrades. Bacterial taxa within the Gammproteobacteria, Alphproteobacteria, Bacteroidota (Flavobacteriia in particular), and Verrucomicrobia, were notable as enriched in the sponge relative to the surrounding water across sponge individuals with diverging microbial communities from the water. These results add novel information on the assembly and maintenance of microbial communities in an ancient metazoan host and is one of few published studies on freshwater sponge microbial symbiont communities.
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spelling doaj-art-6edb10781fad42c4aac4504074231e972025-02-01T15:05:13ZengPeerJ Inc.PeerJ2167-83592025-01-0113e1880710.7717/peerj.18807Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factorsJacqueline G. Keleher0Taylor A. Strope1Noah E. Estrada2Allison M. Griggs Mathis3Cole G. Easson4Cara Fiore5Biology Department, Appalachian State University, Boone, NC, United StatesBiology Department, Appalachian State University, Boone, NC, United StatesBiology Department, Appalachian State University, Boone, NC, United StatesBiology Department, Appalachian State University, Boone, NC, United StatesBiology Department, Middle Tennessee State University, Murfreesboro, TN, United StatesBiology Department, Appalachian State University, Boone, NC, United StatesMarine, and more recently, freshwater sponges are known to harbor unique microbial symbiotic communities relative to the surrounding water; however, our understanding of the microbial ecology and diversity of freshwater sponges is vastly limited compared to those of marine sponges. Here we analyzed the microbiomes of three freshwater sponge species: Radiospongilla crateriformis, Eunapius fragilis, and Trochospongilla horrida, across four sites in western North Carolina, U.S.A. Our results support recent work indicating that freshwater sponges indeed harbor a distinct microbiome composition compared to the surrounding water and that these varied across sampling site indicating both environmental and host factors in shaping this distinct community. We also sampled sponges at one site over 3 months and observed that divergence in the microbial community between sponge and water occurs at least several weeks after sponges emerge for the growing season and that sponges maintain a distinct community from the water as the sponge tissue degrades. Bacterial taxa within the Gammproteobacteria, Alphproteobacteria, Bacteroidota (Flavobacteriia in particular), and Verrucomicrobia, were notable as enriched in the sponge relative to the surrounding water across sponge individuals with diverging microbial communities from the water. These results add novel information on the assembly and maintenance of microbial communities in an ancient metazoan host and is one of few published studies on freshwater sponge microbial symbiont communities.https://peerj.com/articles/18807.pdfFreshwater spongeMicrobiomeRadiospongillaTrochospongillaEunapiusMicrobial ecology
spellingShingle Jacqueline G. Keleher
Taylor A. Strope
Noah E. Estrada
Allison M. Griggs Mathis
Cole G. Easson
Cara Fiore
Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors
PeerJ
Freshwater sponge
Microbiome
Radiospongilla
Trochospongilla
Eunapius
Microbial ecology
title Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors
title_full Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors
title_fullStr Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors
title_full_unstemmed Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors
title_short Freshwater sponges in the southeastern U.S. harbor unique microbiomes that are influenced by host and environmental factors
title_sort freshwater sponges in the southeastern u s harbor unique microbiomes that are influenced by host and environmental factors
topic Freshwater sponge
Microbiome
Radiospongilla
Trochospongilla
Eunapius
Microbial ecology
url https://peerj.com/articles/18807.pdf
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