Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis

Abstract Nonalcoholic fatty liver disease (NAFLD) is a serious threat to public health, but its underlying mechanism remains poorly understood. In screening important genes using Gene Importance Calculator (GIC) we developed previously, ribosomal modification protein rimK-like family member A (RIMKL...

Full description

Saved in:
Bibliographic Details
Main Authors: Han Yan, Wenjun Liu, Rui Xiang, Xin Li, Song Hou, Luzheng Xu, Lin Wang, Dong Zhao, Xingkai Liu, Guoqing Wang, Yujing Chi, Jichun Yang
Format: Article
Language:English
Published: Nature Publishing Group 2024-08-01
Series:Signal Transduction and Targeted Therapy
Online Access:https://doi.org/10.1038/s41392-024-01914-0
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1850109932801622016
author Han Yan
Wenjun Liu
Rui Xiang
Xin Li
Song Hou
Luzheng Xu
Lin Wang
Dong Zhao
Xingkai Liu
Guoqing Wang
Yujing Chi
Jichun Yang
author_facet Han Yan
Wenjun Liu
Rui Xiang
Xin Li
Song Hou
Luzheng Xu
Lin Wang
Dong Zhao
Xingkai Liu
Guoqing Wang
Yujing Chi
Jichun Yang
author_sort Han Yan
collection DOAJ
description Abstract Nonalcoholic fatty liver disease (NAFLD) is a serious threat to public health, but its underlying mechanism remains poorly understood. In screening important genes using Gene Importance Calculator (GIC) we developed previously, ribosomal modification protein rimK-like family member A (RIMKLA) was predicted as one essential gene but its functions remained largely unknown. The current study determined the roles of RIMKLA in regulating glucose and lipid metabolism. RIMKLA expression was reduced in livers of human and mouse with NAFLD. Hepatic RIMKLA overexpression ameliorated steatosis and hyperglycemia in obese mice. Hepatocyte-specific RIMKLA knockout aggravated high-fat diet (HFD)-induced dysregulated glucose/lipid metabolism in mice. Mechanistically, RIMKLA is a new protein kinase that phosphorylates betaine-homocysteine S-methyltransferase 1 (BHMT1) at threonine 45 (Thr45) site. Upon phosphorylation at Thr45 and activation, BHMT1 eliminated homocysteine (Hcy) to inhibit the activity of transcription factor activator protein 1 (AP1) and its induction on fatty acid synthase (FASn) and cluster of differentiation 36 (CD36) gene transcriptions, concurrently repressing lipid synthesis and uptake in hepatocytes. Thr45 to alanine (T45A) mutation inactivated BHMT1 to abolish RIMKLA’s repression on Hcy level, AP1 activity, FASn/CD36 expressions, and lipid deposition. BHMT1 overexpression rescued the dysregulated lipid metabolism in RIMKLA-deficient hepatocytes. In summary, RIMKLA is a novel protein kinase that phosphorylates BHMT1 at Thr45 to repress lipid synthesis and uptake. Under obese condition, inhibition of RIMKLA impairs BHMT1 activity to promote hepatic lipid deposition.
format Article
id doaj-art-6cfa7b406ca44a23b368f7c449cf7705
institution OA Journals
issn 2059-3635
language English
publishDate 2024-08-01
publisher Nature Publishing Group
record_format Article
series Signal Transduction and Targeted Therapy
spelling doaj-art-6cfa7b406ca44a23b368f7c449cf77052025-08-20T02:37:57ZengNature Publishing GroupSignal Transduction and Targeted Therapy2059-36352024-08-019111810.1038/s41392-024-01914-0Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosisHan Yan0Wenjun Liu1Rui Xiang2Xin Li3Song Hou4Luzheng Xu5Lin Wang6Dong Zhao7Xingkai Liu8Guoqing Wang9Yujing Chi10Jichun Yang11Department of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Center for Non-coding RNA Medicine, Peking University Health Science CenterDepartment of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Center for Non-coding RNA Medicine, Peking University Health Science CenterDepartment of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Center for Non-coding RNA Medicine, Peking University Health Science CenterDepartment of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Center for Non-coding RNA Medicine, Peking University Health Science CenterDepartment of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Center for Non-coding RNA Medicine, Peking University Health Science CenterMedical and Health Analysis Center, Peking UniversityDepartment of Hepatobiliary Surgery, Xi-Jing Hospital, Fourth Military Medical UniversityDepartment of Endocrinology, Beijing Luhe Hospital, Capital Medical UniversityDepartment of Hepatobiliary and Pancreatic Surgery, General Surgery Centre, First Hospital of Jilin UniversityKey Laboratory of Pathobiology Ministry of Education, College of Basic Medical Sciences, Jilin UniversityDepartment of Central Laboratory and Institute of Clinical Molecular Biology, Department of Gastroenterology, Peking University People’s HospitalDepartment of Physiology and Pathophysiology, School of Basic Medical Sciences, State Key Laboratory of Vascular Homeostasis and Remodeling, Center for Non-coding RNA Medicine, Peking University Health Science CenterAbstract Nonalcoholic fatty liver disease (NAFLD) is a serious threat to public health, but its underlying mechanism remains poorly understood. In screening important genes using Gene Importance Calculator (GIC) we developed previously, ribosomal modification protein rimK-like family member A (RIMKLA) was predicted as one essential gene but its functions remained largely unknown. The current study determined the roles of RIMKLA in regulating glucose and lipid metabolism. RIMKLA expression was reduced in livers of human and mouse with NAFLD. Hepatic RIMKLA overexpression ameliorated steatosis and hyperglycemia in obese mice. Hepatocyte-specific RIMKLA knockout aggravated high-fat diet (HFD)-induced dysregulated glucose/lipid metabolism in mice. Mechanistically, RIMKLA is a new protein kinase that phosphorylates betaine-homocysteine S-methyltransferase 1 (BHMT1) at threonine 45 (Thr45) site. Upon phosphorylation at Thr45 and activation, BHMT1 eliminated homocysteine (Hcy) to inhibit the activity of transcription factor activator protein 1 (AP1) and its induction on fatty acid synthase (FASn) and cluster of differentiation 36 (CD36) gene transcriptions, concurrently repressing lipid synthesis and uptake in hepatocytes. Thr45 to alanine (T45A) mutation inactivated BHMT1 to abolish RIMKLA’s repression on Hcy level, AP1 activity, FASn/CD36 expressions, and lipid deposition. BHMT1 overexpression rescued the dysregulated lipid metabolism in RIMKLA-deficient hepatocytes. In summary, RIMKLA is a novel protein kinase that phosphorylates BHMT1 at Thr45 to repress lipid synthesis and uptake. Under obese condition, inhibition of RIMKLA impairs BHMT1 activity to promote hepatic lipid deposition.https://doi.org/10.1038/s41392-024-01914-0
spellingShingle Han Yan
Wenjun Liu
Rui Xiang
Xin Li
Song Hou
Luzheng Xu
Lin Wang
Dong Zhao
Xingkai Liu
Guoqing Wang
Yujing Chi
Jichun Yang
Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis
Signal Transduction and Targeted Therapy
title Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis
title_full Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis
title_fullStr Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis
title_full_unstemmed Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis
title_short Ribosomal modification protein rimK-like family member A activates betaine-homocysteine S-methyltransferase 1 to ameliorate hepatic steatosis
title_sort ribosomal modification protein rimk like family member a activates betaine homocysteine s methyltransferase 1 to ameliorate hepatic steatosis
url https://doi.org/10.1038/s41392-024-01914-0
work_keys_str_mv AT hanyan ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT wenjunliu ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT ruixiang ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT xinli ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT songhou ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT luzhengxu ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT linwang ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT dongzhao ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT xingkailiu ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT guoqingwang ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT yujingchi ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis
AT jichunyang ribosomalmodificationproteinrimklikefamilymemberaactivatesbetainehomocysteinesmethyltransferase1toamelioratehepaticsteatosis