Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)

Glomerular diseases characterized by injury to post-mitotic epithelial cells called podocytes are a leading cause of chronic kidney disease. Yet, isolating podocytes from the kidney for transcriptomic, proteomic, and metabolomic studies has been a major technical challenge. Protocols utilizing glome...

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Main Authors: Jeffrey Pippin, Carol Loretz, Diana Eng, Oliver Wessely, Stuart Shankland
Format: Article
Language:English
Published: Bio-protocol LLC 2025-07-01
Series:Bio-Protocol
Online Access:https://bio-protocol.org/en/bpdetail?id=5364&type=0
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author Jeffrey Pippin
Carol Loretz
Diana Eng
Oliver Wessely
Stuart Shankland
author_facet Jeffrey Pippin
Carol Loretz
Diana Eng
Oliver Wessely
Stuart Shankland
author_sort Jeffrey Pippin
collection DOAJ
description Glomerular diseases characterized by injury to post-mitotic epithelial cells called podocytes are a leading cause of chronic kidney disease. Yet, isolating podocytes from the kidney for transcriptomic, proteomic, and metabolomic studies has been a major technical challenge. Protocols utilizing glomerular sieving and laser capture methods are of limited use because they are not podocyte-specific but instead capture all four glomerular cell types. Here, we present a magnetic-activated cell sorting (MACS) method where podocytes are isolated from digested whole kidneys using antibodies specific to extracellular antigens on podocytes. Using microbeaded secondary antibodies binding to the podocyte-specific primary antibodies allows sorting of the podocytes using a magnet. This podocyte-only cell fraction is a unique source of in vivo–derived cells for molecular and cellular experiments.
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spelling doaj-art-6cf5b85fd12943c7b504de2e95011f7f2025-08-20T03:50:32ZengBio-protocol LLCBio-Protocol2331-83252025-07-01151310.21769/BioProtoc.5364Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)Jeffrey Pippin0Carol Loretz1Diana Eng2Oliver Wessely3Stuart Shankland4Division of Nephrology, University of Washington, Seattle, WA, USADivision of Nephrology, University of Washington, Seattle, WA, USADivision of Nephrology, University of Washington, Seattle, WA, USALerner Research Institute, Cleveland Clinic Foundation, Cleveland, OH, USADivision of Nephrology, University of Washington, Seattle, WA, USAGlomerular diseases characterized by injury to post-mitotic epithelial cells called podocytes are a leading cause of chronic kidney disease. Yet, isolating podocytes from the kidney for transcriptomic, proteomic, and metabolomic studies has been a major technical challenge. Protocols utilizing glomerular sieving and laser capture methods are of limited use because they are not podocyte-specific but instead capture all four glomerular cell types. Here, we present a magnetic-activated cell sorting (MACS) method where podocytes are isolated from digested whole kidneys using antibodies specific to extracellular antigens on podocytes. Using microbeaded secondary antibodies binding to the podocyte-specific primary antibodies allows sorting of the podocytes using a magnet. This podocyte-only cell fraction is a unique source of in vivo–derived cells for molecular and cellular experiments.https://bio-protocol.org/en/bpdetail?id=5364&type=0
spellingShingle Jeffrey Pippin
Carol Loretz
Diana Eng
Oliver Wessely
Stuart Shankland
Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)
Bio-Protocol
title Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)
title_full Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)
title_fullStr Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)
title_full_unstemmed Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)
title_short Isolation of Podocyte Cell Fractions From Mouse Kidney Using Magnetic Activated Cell Sorting (MACS)
title_sort isolation of podocyte cell fractions from mouse kidney using magnetic activated cell sorting macs
url https://bio-protocol.org/en/bpdetail?id=5364&type=0
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