Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.

Plant-based polyphenols (i.e., phytochemicals) have been used as treatments for human ailments for centuries. The mechanisms of action of these plant-derived compounds are now a major area of investigation. Thousands of phytochemicals have been isolated, and a large number of them have shown protect...

Full description

Saved in:
Bibliographic Details
Main Authors: Hanyong Chen, Ke Yao, Janos Nadas, Ann M Bode, Margarita Malakhova, Naomi Oi, Haitao Li, Ronald A Lubet, Zigang Dong
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2012-01-01
Series:PLoS ONE
Online Access:https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0038261&type=printable
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1850224954997473280
author Hanyong Chen
Ke Yao
Janos Nadas
Ann M Bode
Margarita Malakhova
Naomi Oi
Haitao Li
Ronald A Lubet
Zigang Dong
author_facet Hanyong Chen
Ke Yao
Janos Nadas
Ann M Bode
Margarita Malakhova
Naomi Oi
Haitao Li
Ronald A Lubet
Zigang Dong
author_sort Hanyong Chen
collection DOAJ
description Plant-based polyphenols (i.e., phytochemicals) have been used as treatments for human ailments for centuries. The mechanisms of action of these plant-derived compounds are now a major area of investigation. Thousands of phytochemicals have been isolated, and a large number of them have shown protective activities or effects in different disease models. Using conventional approaches to select the best single or group of best chemicals for studying the effectiveness in treating or preventing disease is extremely challenging. We have developed and used computational-based methodologies that provide efficient and inexpensive tools to gain further understanding of the anticancer and therapeutic effects exerted by phytochemicals. Computational methods involving virtual screening, shape and pharmacophore analysis and molecular docking have been used to select chemicals that target a particular protein or enzyme and to determine potential protein targets for well-characterized as well as for novel phytochemicals.
format Article
id doaj-art-6b8767255c4f4de8a0f3d80118ce82dd
institution OA Journals
issn 1932-6203
language English
publishDate 2012-01-01
publisher Public Library of Science (PLoS)
record_format Article
series PLoS ONE
spelling doaj-art-6b8767255c4f4de8a0f3d80118ce82dd2025-08-20T02:05:29ZengPublic Library of Science (PLoS)PLoS ONE1932-62032012-01-0175e3826110.1371/journal.pone.0038261Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.Hanyong ChenKe YaoJanos NadasAnn M BodeMargarita MalakhovaNaomi OiHaitao LiRonald A LubetZigang DongPlant-based polyphenols (i.e., phytochemicals) have been used as treatments for human ailments for centuries. The mechanisms of action of these plant-derived compounds are now a major area of investigation. Thousands of phytochemicals have been isolated, and a large number of them have shown protective activities or effects in different disease models. Using conventional approaches to select the best single or group of best chemicals for studying the effectiveness in treating or preventing disease is extremely challenging. We have developed and used computational-based methodologies that provide efficient and inexpensive tools to gain further understanding of the anticancer and therapeutic effects exerted by phytochemicals. Computational methods involving virtual screening, shape and pharmacophore analysis and molecular docking have been used to select chemicals that target a particular protein or enzyme and to determine potential protein targets for well-characterized as well as for novel phytochemicals.https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0038261&type=printable
spellingShingle Hanyong Chen
Ke Yao
Janos Nadas
Ann M Bode
Margarita Malakhova
Naomi Oi
Haitao Li
Ronald A Lubet
Zigang Dong
Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.
PLoS ONE
title Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.
title_full Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.
title_fullStr Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.
title_full_unstemmed Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.
title_short Prediction of molecular targets of cancer preventing flavonoid compounds using computational methods.
title_sort prediction of molecular targets of cancer preventing flavonoid compounds using computational methods
url https://journals.plos.org/plosone/article/file?id=10.1371/journal.pone.0038261&type=printable
work_keys_str_mv AT hanyongchen predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT keyao predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT janosnadas predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT annmbode predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT margaritamalakhova predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT naomioi predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT haitaoli predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT ronaldalubet predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods
AT zigangdong predictionofmoleculartargetsofcancerpreventingflavonoidcompoundsusingcomputationalmethods