Review of Methods for Studying Viruses in the Environment and Organisms

Recent decades have seen growing attention on viruses in the environment and their potential impacts as a result of global epidemics. Due to the diversity of viral species along with the complexity of environmental and host factors, virus extraction and detection methods have become key for the stud...

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Main Authors: Xinyue Wang, Tong Ma, Zhiyuan Chen, Yang Liu, Kexin Wang, Guangxiu Liu, Kesheng Li, Tuo Chen, Gaosen Zhang, Wei Zhang, Binglin Zhang
Format: Article
Language:English
Published: MDPI AG 2025-01-01
Series:Viruses
Subjects:
Online Access:https://www.mdpi.com/1999-4915/17/1/86
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author Xinyue Wang
Tong Ma
Zhiyuan Chen
Yang Liu
Kexin Wang
Guangxiu Liu
Kesheng Li
Tuo Chen
Gaosen Zhang
Wei Zhang
Binglin Zhang
author_facet Xinyue Wang
Tong Ma
Zhiyuan Chen
Yang Liu
Kexin Wang
Guangxiu Liu
Kesheng Li
Tuo Chen
Gaosen Zhang
Wei Zhang
Binglin Zhang
author_sort Xinyue Wang
collection DOAJ
description Recent decades have seen growing attention on viruses in the environment and their potential impacts as a result of global epidemics. Due to the diversity of viral species along with the complexity of environmental and host factors, virus extraction and detection methods have become key for the study of virus ecology. This review systematically summarises the methods for extracting and detecting pathogens from different environmental samples (e.g., soil, water, faeces, air) and biological samples (e.g., plants, animals) in existing studies, comparing their similarities and differences, applicability, as well as the advantages and disadvantages of each method. Additionally, this review discusses future directions for research in this field. The aim is to provide a theoretical foundation and technical reference for virus ecology research, facilitating further exploration and applications in this field.
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series Viruses
spelling doaj-art-632c144671bd4610b6599a3c9a72a2592025-01-24T13:52:32ZengMDPI AGViruses1999-49152025-01-011718610.3390/v17010086Review of Methods for Studying Viruses in the Environment and OrganismsXinyue Wang0Tong Ma1Zhiyuan Chen2Yang Liu3Kexin Wang4Guangxiu Liu5Kesheng Li6Tuo Chen7Gaosen Zhang8Wei Zhang9Binglin Zhang10Key Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, ChinaKey Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, ChinaKey Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, ChinaKey Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, ChinaKey Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, ChinaKey Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, ChinaLanzhou Yahua Biotechnology Company, Lanzhou 730050, ChinaKey Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, ChinaKey Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, ChinaKey Laboratory of Ecological Safety and Sustainable Development in Arid Lands, Northwest Institute of Eco-Environment and Resources, Chinese Academy of Sciences, Lanzhou 730000, ChinaKey Laboratory of Extreme Environmental Microbial Resources and Engineering, Lanzhou 730000, ChinaRecent decades have seen growing attention on viruses in the environment and their potential impacts as a result of global epidemics. Due to the diversity of viral species along with the complexity of environmental and host factors, virus extraction and detection methods have become key for the study of virus ecology. This review systematically summarises the methods for extracting and detecting pathogens from different environmental samples (e.g., soil, water, faeces, air) and biological samples (e.g., plants, animals) in existing studies, comparing their similarities and differences, applicability, as well as the advantages and disadvantages of each method. Additionally, this review discusses future directions for research in this field. The aim is to provide a theoretical foundation and technical reference for virus ecology research, facilitating further exploration and applications in this field.https://www.mdpi.com/1999-4915/17/1/86virus communitiesenvironmental samplesorganism samplesresearch methods
spellingShingle Xinyue Wang
Tong Ma
Zhiyuan Chen
Yang Liu
Kexin Wang
Guangxiu Liu
Kesheng Li
Tuo Chen
Gaosen Zhang
Wei Zhang
Binglin Zhang
Review of Methods for Studying Viruses in the Environment and Organisms
Viruses
virus communities
environmental samples
organism samples
research methods
title Review of Methods for Studying Viruses in the Environment and Organisms
title_full Review of Methods for Studying Viruses in the Environment and Organisms
title_fullStr Review of Methods for Studying Viruses in the Environment and Organisms
title_full_unstemmed Review of Methods for Studying Viruses in the Environment and Organisms
title_short Review of Methods for Studying Viruses in the Environment and Organisms
title_sort review of methods for studying viruses in the environment and organisms
topic virus communities
environmental samples
organism samples
research methods
url https://www.mdpi.com/1999-4915/17/1/86
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