Mutators can drive the evolution of multi-resistance to antibiotics.

Antibiotic combination therapies are an approach used to counter the evolution of resistance; their purported benefit is they can stop the successive emergence of independent resistance mutations in the same genome. Here, we show that bacterial populations with 'mutators', organisms with d...

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Main Authors: Danna R Gifford, Ernesto Berríos-Caro, Christine Joerres, Marc Suñé, Jessica H Forsyth, Anish Bhattacharyya, Tobias Galla, Christopher G Knight
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2023-06-01
Series:PLoS Genetics
Online Access:https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1010791&type=printable
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author Danna R Gifford
Ernesto Berríos-Caro
Christine Joerres
Marc Suñé
Jessica H Forsyth
Anish Bhattacharyya
Tobias Galla
Christopher G Knight
author_facet Danna R Gifford
Ernesto Berríos-Caro
Christine Joerres
Marc Suñé
Jessica H Forsyth
Anish Bhattacharyya
Tobias Galla
Christopher G Knight
author_sort Danna R Gifford
collection DOAJ
description Antibiotic combination therapies are an approach used to counter the evolution of resistance; their purported benefit is they can stop the successive emergence of independent resistance mutations in the same genome. Here, we show that bacterial populations with 'mutators', organisms with defects in DNA repair, readily evolve resistance to combination antibiotic treatment when there is a delay in reaching inhibitory concentrations of antibiotic-under conditions where purely wild-type populations cannot. In populations of Escherichia coli subjected to combination treatment, we detected a diverse array of acquired mutations, including multiple alleles in the canonical targets of resistance for the two drugs, as well as mutations in multi-drug efflux pumps and genes involved in DNA replication and repair. Unexpectedly, mutators not only allowed multi-resistance to evolve under combination treatment where it was favoured, but also under single-drug treatments. Using simulations, we show that the increase in mutation rate of the two canonical resistance targets is sufficient to permit multi-resistance evolution in both single-drug and combination treatments. Under both conditions, the mutator allele swept to fixation through hitch-hiking with single-drug resistance, enabling subsequent resistance mutations to emerge. Ultimately, our results suggest that mutators may hinder the utility of combination therapy when mutators are present. Additionally, by raising the rates of genetic mutation, selection for multi-resistance may have the unwanted side-effect of increasing the potential to evolve resistance to future antibiotic treatments.
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institution Kabale University
issn 1553-7390
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language English
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publisher Public Library of Science (PLoS)
record_format Article
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spelling doaj-art-618e28fcca6d4a6fadc5b96b05db89c22025-08-20T03:46:20ZengPublic Library of Science (PLoS)PLoS Genetics1553-73901553-74042023-06-01196e101079110.1371/journal.pgen.1010791Mutators can drive the evolution of multi-resistance to antibiotics.Danna R GiffordErnesto Berríos-CaroChristine JoerresMarc SuñéJessica H ForsythAnish BhattacharyyaTobias GallaChristopher G KnightAntibiotic combination therapies are an approach used to counter the evolution of resistance; their purported benefit is they can stop the successive emergence of independent resistance mutations in the same genome. Here, we show that bacterial populations with 'mutators', organisms with defects in DNA repair, readily evolve resistance to combination antibiotic treatment when there is a delay in reaching inhibitory concentrations of antibiotic-under conditions where purely wild-type populations cannot. In populations of Escherichia coli subjected to combination treatment, we detected a diverse array of acquired mutations, including multiple alleles in the canonical targets of resistance for the two drugs, as well as mutations in multi-drug efflux pumps and genes involved in DNA replication and repair. Unexpectedly, mutators not only allowed multi-resistance to evolve under combination treatment where it was favoured, but also under single-drug treatments. Using simulations, we show that the increase in mutation rate of the two canonical resistance targets is sufficient to permit multi-resistance evolution in both single-drug and combination treatments. Under both conditions, the mutator allele swept to fixation through hitch-hiking with single-drug resistance, enabling subsequent resistance mutations to emerge. Ultimately, our results suggest that mutators may hinder the utility of combination therapy when mutators are present. Additionally, by raising the rates of genetic mutation, selection for multi-resistance may have the unwanted side-effect of increasing the potential to evolve resistance to future antibiotic treatments.https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1010791&type=printable
spellingShingle Danna R Gifford
Ernesto Berríos-Caro
Christine Joerres
Marc Suñé
Jessica H Forsyth
Anish Bhattacharyya
Tobias Galla
Christopher G Knight
Mutators can drive the evolution of multi-resistance to antibiotics.
PLoS Genetics
title Mutators can drive the evolution of multi-resistance to antibiotics.
title_full Mutators can drive the evolution of multi-resistance to antibiotics.
title_fullStr Mutators can drive the evolution of multi-resistance to antibiotics.
title_full_unstemmed Mutators can drive the evolution of multi-resistance to antibiotics.
title_short Mutators can drive the evolution of multi-resistance to antibiotics.
title_sort mutators can drive the evolution of multi resistance to antibiotics
url https://journals.plos.org/plosgenetics/article/file?id=10.1371/journal.pgen.1010791&type=printable
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