Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions

Fermentation is a promising food processing technique that has been used throughout history for its role in food preservation, the enhancement of nutritional content, and improvement of sensory attributes. Beyond the primary probiotic benefits, microorganisms in fermented foods play a functional rol...

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Main Authors: Akanksha Singh, Sanjay Kumar
Format: Article
Language:English
Published: MDPI AG 2025-05-01
Series:Fermentation
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Online Access:https://www.mdpi.com/2311-5637/11/6/300
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author Akanksha Singh
Sanjay Kumar
author_facet Akanksha Singh
Sanjay Kumar
author_sort Akanksha Singh
collection DOAJ
description Fermentation is a promising food processing technique that has been used throughout history for its role in food preservation, the enhancement of nutritional content, and improvement of sensory attributes. Beyond the primary probiotic benefits, microorganisms in fermented foods play a functional role in increasing nutrient bioavailability, exhibiting antimicrobial properties, producing bioactive compounds, and removing antinutritional factors. This review explores microbial diversity and its role in the production of fermented foods across different regions of the world through a dynamic market analysis. It also highlights recent biotechnological advancements in fermentation, specifically the use of omics, multi-omics, and precision fermentation. Omics technologies have been found to provide a deeper insight into microbial diversity, deciphering their metabolic pathways and functional interactions, whereas precision fermentation is being used for the manipulation of microbial processes to optimize the fermentation process and produce the desired attributes in fermented foods. Various sustainable substrates have also been used in the production of fermented foods, apart from the conventional ones. Interestingly, this review discusses the growing role of artificial intelligence, machine learning, and the Internet of Things in food fermentation, focusing on their potential to optimize processes, predict microbial interactions, and improve quality control, supported by relevant successful examples. The review also examines the current challenges faced by the fermented food industry, offering various mitigation strategies to overcome these obstacles. Possible future prospects are also explored. Through a combination of traditional methods and modern biotechnological innovations, functional fermentation is bound to transform the global food industry.
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spelling doaj-art-5dcc60bd912c4bd78587cec25448aa7c2025-08-20T03:27:10ZengMDPI AGFermentation2311-56372025-05-0111630010.3390/fermentation11060300Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future DirectionsAkanksha Singh0Sanjay Kumar1Biofuel Research Laboratory, School of Biochemical Engineering, Indian Institute of Technology (BHU) Varanasi, Varanasi 221005, Uttar Pradesh, IndiaBiofuel Research Laboratory, School of Biochemical Engineering, Indian Institute of Technology (BHU) Varanasi, Varanasi 221005, Uttar Pradesh, IndiaFermentation is a promising food processing technique that has been used throughout history for its role in food preservation, the enhancement of nutritional content, and improvement of sensory attributes. Beyond the primary probiotic benefits, microorganisms in fermented foods play a functional role in increasing nutrient bioavailability, exhibiting antimicrobial properties, producing bioactive compounds, and removing antinutritional factors. This review explores microbial diversity and its role in the production of fermented foods across different regions of the world through a dynamic market analysis. It also highlights recent biotechnological advancements in fermentation, specifically the use of omics, multi-omics, and precision fermentation. Omics technologies have been found to provide a deeper insight into microbial diversity, deciphering their metabolic pathways and functional interactions, whereas precision fermentation is being used for the manipulation of microbial processes to optimize the fermentation process and produce the desired attributes in fermented foods. Various sustainable substrates have also been used in the production of fermented foods, apart from the conventional ones. Interestingly, this review discusses the growing role of artificial intelligence, machine learning, and the Internet of Things in food fermentation, focusing on their potential to optimize processes, predict microbial interactions, and improve quality control, supported by relevant successful examples. The review also examines the current challenges faced by the fermented food industry, offering various mitigation strategies to overcome these obstacles. Possible future prospects are also explored. Through a combination of traditional methods and modern biotechnological innovations, functional fermentation is bound to transform the global food industry.https://www.mdpi.com/2311-5637/11/6/300fermented foodsomicsmulti-omicsprecision fermentationartificial intelligencemachine learning
spellingShingle Akanksha Singh
Sanjay Kumar
Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions
Fermentation
fermented foods
omics
multi-omics
precision fermentation
artificial intelligence
machine learning
title Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions
title_full Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions
title_fullStr Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions
title_full_unstemmed Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions
title_short Exploring the Functionality of Microbes in Fermented Foods: Technological Advancements and Future Directions
title_sort exploring the functionality of microbes in fermented foods technological advancements and future directions
topic fermented foods
omics
multi-omics
precision fermentation
artificial intelligence
machine learning
url https://www.mdpi.com/2311-5637/11/6/300
work_keys_str_mv AT akankshasingh exploringthefunctionalityofmicrobesinfermentedfoodstechnologicaladvancementsandfuturedirections
AT sanjaykumar exploringthefunctionalityofmicrobesinfermentedfoodstechnologicaladvancementsandfuturedirections