Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K

This study presents the synthesis, crystal structure, and a Hirshfeld-surface analysis of the bioactive compound 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate(C10H9N3O5S), a pyrazole derivative with pharmacological potential. Pyrazoles are known for diverse bioactivities, and recent research emph...

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Main Authors: Vinaya, Syida A. Yakuth, Thaluru M. Mohan Kumar, Besagarahally L. Bhaskar, Thayamma R. Divakara, Hemmige S. Yathirajan, Yeriyur B. Basavaraju, Sean Parkin
Format: Article
Language:English
Published: International Union of Crystallography 2024-12-01
Series:Acta Crystallographica Section E: Crystallographic Communications
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Online Access:https://journals.iucr.org/paper?S205698902401140X
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author Vinaya
Syida A. Yakuth
Thaluru M. Mohan Kumar
Besagarahally L. Bhaskar
Thayamma R. Divakara
Hemmige S. Yathirajan
Yeriyur B. Basavaraju
Sean Parkin
author_facet Vinaya
Syida A. Yakuth
Thaluru M. Mohan Kumar
Besagarahally L. Bhaskar
Thayamma R. Divakara
Hemmige S. Yathirajan
Yeriyur B. Basavaraju
Sean Parkin
author_sort Vinaya
collection DOAJ
description This study presents the synthesis, crystal structure, and a Hirshfeld-surface analysis of the bioactive compound 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate(C10H9N3O5S), a pyrazole derivative with pharmacological potential. Pyrazoles are known for diverse bioactivities, and recent research emphasizes their role as a ‘privileged structure’ in drug design. Here, the asymmetric unit of the title compound contains two distinct molecules, A and B, exhibiting differences in conformation resulting from variation in key torsion angles. These distinctions influence the molecular orientation and intermolecular interactions, with strong N—H...N and N—H...O hydrogen bonds forming a centrosymmetric tetramer stabilized by π–π stacking. Hirshfeld surface analysis readily confirms differing intermolecular contacts for A and B, primarily involving hydrogen atoms and differences in their close contacts to nitrogen and oxygen. This study offers further insight into the molecular architecture and potential interactions of pyrazole-based drug candidates.
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publishDate 2024-12-01
publisher International Union of Crystallography
record_format Article
series Acta Crystallographica Section E: Crystallographic Communications
spelling doaj-art-5a85f311ff764fc5985d7edc49e15bef2025-08-20T02:19:08ZengInternational Union of CrystallographyActa Crystallographica Section E: Crystallographic Communications2056-98902024-12-0180121354135810.1107/S205698902401140Xnx2016Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 KVinaya0Syida A. Yakuth1Thaluru M. Mohan Kumar2Besagarahally L. Bhaskar3Thayamma R. Divakara4Hemmige S. Yathirajan5Yeriyur B. Basavaraju6Sean Parkin7Department of Studies in Chemistry, University of Mysore, Manasagangotri, Mysuru-570 006, IndiaDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysuru-570 006, IndiaDepartment of Physical Sciences, Amrita School of Engineering, Amrita Vishwa Vidyapeetham, Bengaluru-560 035, IndiaDepartment of Physical Sciences, Amrita School of Engineering, Amrita Vishwa Vidyapeetham, Bengaluru-560 035, IndiaDepartment of Chemistry, T. John Institute of Technology, Bengaluru-560 083, IndiaDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysuru-570 006, IndiaDepartment of Studies in Chemistry, University of Mysore, Manasagangotri, Mysuru-570 006, IndiaDepartment of Chemistry, University of Kentucky, Lexington, KY, 40506-0055, USAThis study presents the synthesis, crystal structure, and a Hirshfeld-surface analysis of the bioactive compound 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate(C10H9N3O5S), a pyrazole derivative with pharmacological potential. Pyrazoles are known for diverse bioactivities, and recent research emphasizes their role as a ‘privileged structure’ in drug design. Here, the asymmetric unit of the title compound contains two distinct molecules, A and B, exhibiting differences in conformation resulting from variation in key torsion angles. These distinctions influence the molecular orientation and intermolecular interactions, with strong N—H...N and N—H...O hydrogen bonds forming a centrosymmetric tetramer stabilized by π–π stacking. Hirshfeld surface analysis readily confirms differing intermolecular contacts for A and B, primarily involving hydrogen atoms and differences in their close contacts to nitrogen and oxygen. This study offers further insight into the molecular architecture and potential interactions of pyrazole-based drug candidates.https://journals.iucr.org/paper?S205698902401140Xsynthesiscrystal structurehirshfeld surfacehydrogen bondingπ–π stackingcentrosymmetric tetramer
spellingShingle Vinaya
Syida A. Yakuth
Thaluru M. Mohan Kumar
Besagarahally L. Bhaskar
Thayamma R. Divakara
Hemmige S. Yathirajan
Yeriyur B. Basavaraju
Sean Parkin
Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K
Acta Crystallographica Section E: Crystallographic Communications
synthesis
crystal structure
hirshfeld surface
hydrogen bonding
π–π stacking
centrosymmetric tetramer
title Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K
title_full Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K
title_fullStr Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K
title_full_unstemmed Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K
title_short Synthesis, crystal structure and Hirshfeld surface analysis of 5-methyl-1H-pyrazol-3-yl 4-nitrobenzenesulfonate at 90 K
title_sort synthesis crystal structure and hirshfeld surface analysis of 5 methyl 1h pyrazol 3 yl 4 nitrobenzenesulfonate at 90 k
topic synthesis
crystal structure
hirshfeld surface
hydrogen bonding
π–π stacking
centrosymmetric tetramer
url https://journals.iucr.org/paper?S205698902401140X
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