Application of signed graph in amino acid network
This article is aimed to construct a model related to protein structure and amino acids viz., Brandstein and Tooze's condition. To study Brandstein and Tooze's condition we have considered signed graph in amino acids. For this we have constructed a network structure, where the link is base...
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| Format: | Article |
| Language: | English |
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International Academy of Ecology and Environmental Sciences
2025-03-01
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| Series: | Network Biology |
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| Online Access: | http://www.iaees.org/publications/journals/nb/articles/2025-15(1)/signed-graph-in-amino-acid-network.pdf |
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| author | Adil Akhtar Nasrin Irshad Hussain |
| author_facet | Adil Akhtar Nasrin Irshad Hussain |
| author_sort | Adil Akhtar |
| collection | DOAJ |
| description | This article is aimed to construct a model related to protein structure and amino acids viz., Brandstein and Tooze's condition. To study Brandstein and Tooze's condition we have considered signed graph in amino acids. For this we have constructed a network structure, where the link is based on the one point mutation of codons of corresponding 20 different essential amino acids. To study this we have considered signed graph in amino acids and consider two cases. In the first case positive sign is assigned to an edge if both the amino acids are either hydrophobic or hydrophilic, otherwise negative sign is assigned. And in the second case positive sign is assigned to an edge if one amino acid is hydrophobic and the other is hydrophilic, otherwise negative sign is assigned. |
| format | Article |
| id | doaj-art-545d210ea1154054914cf2e188f43b21 |
| institution | OA Journals |
| issn | 2220-8879 |
| language | English |
| publishDate | 2025-03-01 |
| publisher | International Academy of Ecology and Environmental Sciences |
| record_format | Article |
| series | Network Biology |
| spelling | doaj-art-545d210ea1154054914cf2e188f43b212025-08-20T02:13:53ZengInternational Academy of Ecology and Environmental SciencesNetwork Biology2220-88792025-03-011511523Application of signed graph in amino acid networkAdil Akhtar0Nasrin Irshad Hussain1Department of Mathematics, Golaghat Engineering College, Assam 785621, IndiaDepartment of Computer Application, Sibsagar University, Assam 785665, IndiaThis article is aimed to construct a model related to protein structure and amino acids viz., Brandstein and Tooze's condition. To study Brandstein and Tooze's condition we have considered signed graph in amino acids. For this we have constructed a network structure, where the link is based on the one point mutation of codons of corresponding 20 different essential amino acids. To study this we have considered signed graph in amino acids and consider two cases. In the first case positive sign is assigned to an edge if both the amino acids are either hydrophobic or hydrophilic, otherwise negative sign is assigned. And in the second case positive sign is assigned to an edge if one amino acid is hydrophobic and the other is hydrophilic, otherwise negative sign is assigned.http://www.iaees.org/publications/journals/nb/articles/2025-15(1)/signed-graph-in-amino-acid-network.pdfamino acidgraphchemical graphsigned graph |
| spellingShingle | Adil Akhtar Nasrin Irshad Hussain Application of signed graph in amino acid network Network Biology amino acid graph chemical graph signed graph |
| title | Application of signed graph in amino acid network |
| title_full | Application of signed graph in amino acid network |
| title_fullStr | Application of signed graph in amino acid network |
| title_full_unstemmed | Application of signed graph in amino acid network |
| title_short | Application of signed graph in amino acid network |
| title_sort | application of signed graph in amino acid network |
| topic | amino acid graph chemical graph signed graph |
| url | http://www.iaees.org/publications/journals/nb/articles/2025-15(1)/signed-graph-in-amino-acid-network.pdf |
| work_keys_str_mv | AT adilakhtar applicationofsignedgraphinaminoacidnetwork AT nasrinirshadhussain applicationofsignedgraphinaminoacidnetwork |