Pedigree analysis of the Latvian Warmblood horse heavy type population

A breeding program has been developed for the Latvian warmblood heavy type horses in Latvia, with the aim to preserve this type, because the number of these horses is small and the status of the local endangered breed has been granted. The aim of the study was to analyse the genetic structure, inbre...

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Main Authors: Viktorija Nikonova, Daina Jonkus, Liga Paura
Format: Article
Language:English
Published: Czech Academy of Agricultural Sciences 2024-11-01
Series:Czech Journal of Animal Science
Subjects:
Online Access:https://cjas.agriculturejournals.cz/artkey/cjs-202411-0004_pedigree-analysis-of-the-latvian-warmblood-horse-heavy-type-population.php
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author Viktorija Nikonova
Daina Jonkus
Liga Paura
author_facet Viktorija Nikonova
Daina Jonkus
Liga Paura
author_sort Viktorija Nikonova
collection DOAJ
description A breeding program has been developed for the Latvian warmblood heavy type horses in Latvia, with the aim to preserve this type, because the number of these horses is small and the status of the local endangered breed has been granted. The aim of the study was to analyse the genetic structure, inbreeding and effective population size of the Latvian warmblood heavy type (LSB) horse population. Horses that were living at the time of the study on January 1, 2023 were used for the study. A total of 374 genetic resources live horses were analysed. Population structure analysis, inbreeding and effective population size were investigated. Calculations were done by POPREP (v1.0) software. The effective population size (Ne) decreased, however, since 2018 the decline in the size of the effective population has not been so rapid. In 2000, the Ne was 316 animals, and in 2020, it was 101 animals. Over the years, changes in the average inbreeding level in the LSB population were observed from year to year. In 2000, inbreeding was 1.39%, and in 2020 it was 1.47% with the average inbreeding level of 1.12%. Over the last 20 years, large changes in Ne have been observed, thus, the loss of genetic diversity in the LSB breed should be controlled.
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publishDate 2024-11-01
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spelling doaj-art-51ab4415977147ffa3edb6565e5fe4712025-08-20T02:48:57ZengCzech Academy of Agricultural SciencesCzech Journal of Animal Science1212-18191805-93092024-11-01691146246910.17221/147/2024-CJAScjs-202411-0004Pedigree analysis of the Latvian Warmblood horse heavy type populationViktorija Nikonova0Daina Jonkus1Liga Paura2Latvia University of Life Sciences and Technologies, Jelgava, LatviaLatvia University of Life Sciences and Technologies, Jelgava, LatviaLatvia University of Life Sciences and Technologies, Jelgava, LatviaA breeding program has been developed for the Latvian warmblood heavy type horses in Latvia, with the aim to preserve this type, because the number of these horses is small and the status of the local endangered breed has been granted. The aim of the study was to analyse the genetic structure, inbreeding and effective population size of the Latvian warmblood heavy type (LSB) horse population. Horses that were living at the time of the study on January 1, 2023 were used for the study. A total of 374 genetic resources live horses were analysed. Population structure analysis, inbreeding and effective population size were investigated. Calculations were done by POPREP (v1.0) software. The effective population size (Ne) decreased, however, since 2018 the decline in the size of the effective population has not been so rapid. In 2000, the Ne was 316 animals, and in 2020, it was 101 animals. Over the years, changes in the average inbreeding level in the LSB population were observed from year to year. In 2000, inbreeding was 1.39%, and in 2020 it was 1.47% with the average inbreeding level of 1.12%. Over the last 20 years, large changes in Ne have been observed, thus, the loss of genetic diversity in the LSB breed should be controlled.https://cjas.agriculturejournals.cz/artkey/cjs-202411-0004_pedigree-analysis-of-the-latvian-warmblood-horse-heavy-type-population.phpeffective populationgeneration intervalinbreedinghorse breeding
spellingShingle Viktorija Nikonova
Daina Jonkus
Liga Paura
Pedigree analysis of the Latvian Warmblood horse heavy type population
Czech Journal of Animal Science
effective population
generation interval
inbreeding
horse breeding
title Pedigree analysis of the Latvian Warmblood horse heavy type population
title_full Pedigree analysis of the Latvian Warmblood horse heavy type population
title_fullStr Pedigree analysis of the Latvian Warmblood horse heavy type population
title_full_unstemmed Pedigree analysis of the Latvian Warmblood horse heavy type population
title_short Pedigree analysis of the Latvian Warmblood horse heavy type population
title_sort pedigree analysis of the latvian warmblood horse heavy type population
topic effective population
generation interval
inbreeding
horse breeding
url https://cjas.agriculturejournals.cz/artkey/cjs-202411-0004_pedigree-analysis-of-the-latvian-warmblood-horse-heavy-type-population.php
work_keys_str_mv AT viktorijanikonova pedigreeanalysisofthelatvianwarmbloodhorseheavytypepopulation
AT dainajonkus pedigreeanalysisofthelatvianwarmbloodhorseheavytypepopulation
AT ligapaura pedigreeanalysisofthelatvianwarmbloodhorseheavytypepopulation