An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA

MicroRNAs (miRNAs) are small, non-coding RNAs that play pivotal roles in gene regulation; they are increasingly recognized as vital biomarkers for various diseases, notably cancer. Conventional methods for miRNA detection, such as quantitative PCR and microarray analysis, often entail intricate samp...

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Main Authors: Hongbo Zhang, Xiuen Cao, Qubo Zhu
Format: Article
Language:English
Published: Bio-protocol LLC 2024-12-01
Series:Bio-Protocol
Online Access:https://bio-protocol.org/en/bpdetail?id=5134&type=0
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author Hongbo Zhang
Xiuen Cao
Qubo Zhu
author_facet Hongbo Zhang
Xiuen Cao
Qubo Zhu
author_sort Hongbo Zhang
collection DOAJ
description MicroRNAs (miRNAs) are small, non-coding RNAs that play pivotal roles in gene regulation; they are increasingly recognized as vital biomarkers for various diseases, notably cancer. Conventional methods for miRNA detection, such as quantitative PCR and microarray analysis, often entail intricate sample preparation and lack the requisite sensitivity to detect low-abundance miRNAs like miRNA-21. This protocol presents an innovative approach that combines branched hybridization chain reaction (bHCR) with DNAzyme technology for the precise detection of miRNA-21. The bHCR amplifies the target signal through a branched structure, while the DNAzyme boosts detection sensitivity through catalytic cleavage, enabling swift and specific identification of miRNA-21. This dual amplification strategy offers a highly sensitive, specific, and rapid alternative to traditional techniques, making it particularly well-suited for early-stage disease diagnosis.
format Article
id doaj-art-512ca47c31b545f183a9953e94b12428
institution Kabale University
issn 2331-8325
language English
publishDate 2024-12-01
publisher Bio-protocol LLC
record_format Article
series Bio-Protocol
spelling doaj-art-512ca47c31b545f183a9953e94b124282025-02-07T08:16:22ZengBio-protocol LLCBio-Protocol2331-83252024-12-01142410.21769/BioProtoc.5134An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNAHongbo Zhang0Xiuen Cao1Qubo Zhu2Xiangya School of Pharmaceutical Sciences, Central South University, Changsha, ChinaXiangya School of Pharmaceutical Sciences, Central South University, Changsha, ChinaXiangya School of Pharmaceutical Sciences, Central South University, Changsha, ChinaMicroRNAs (miRNAs) are small, non-coding RNAs that play pivotal roles in gene regulation; they are increasingly recognized as vital biomarkers for various diseases, notably cancer. Conventional methods for miRNA detection, such as quantitative PCR and microarray analysis, often entail intricate sample preparation and lack the requisite sensitivity to detect low-abundance miRNAs like miRNA-21. This protocol presents an innovative approach that combines branched hybridization chain reaction (bHCR) with DNAzyme technology for the precise detection of miRNA-21. The bHCR amplifies the target signal through a branched structure, while the DNAzyme boosts detection sensitivity through catalytic cleavage, enabling swift and specific identification of miRNA-21. This dual amplification strategy offers a highly sensitive, specific, and rapid alternative to traditional techniques, making it particularly well-suited for early-stage disease diagnosis.https://bio-protocol.org/en/bpdetail?id=5134&type=0
spellingShingle Hongbo Zhang
Xiuen Cao
Qubo Zhu
An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA
Bio-Protocol
title An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA
title_full An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA
title_fullStr An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA
title_full_unstemmed An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA
title_short An Autocatalytic Platform Combining a Nonlinear Hybridization Chain Reaction and DNAzyme to Detect microRNA
title_sort autocatalytic platform combining a nonlinear hybridization chain reaction and dnazyme to detect microrna
url https://bio-protocol.org/en/bpdetail?id=5134&type=0
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