Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae)
Abstract Sambus kanssuensis Ganglbauer, 1890 (Coleoptera: Buprestidae), distributed in Gansu and Sichuan Provinces of China, is a phytophagous pest that feeds on the toxic plant Buddleja. However, the genomic resources of this beetle remain unknown, which impedes the understanding of its ecological...
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Nature Portfolio
2025-05-01
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| Series: | Scientific Data |
| Online Access: | https://doi.org/10.1038/s41597-025-05271-7 |
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| author | Zhonghua Wei Yunchun Li Yingying Li Jiuzhou Liu Shuangmei Ding Xulong Chen Aimin Shi Ding Yang |
| author_facet | Zhonghua Wei Yunchun Li Yingying Li Jiuzhou Liu Shuangmei Ding Xulong Chen Aimin Shi Ding Yang |
| author_sort | Zhonghua Wei |
| collection | DOAJ |
| description | Abstract Sambus kanssuensis Ganglbauer, 1890 (Coleoptera: Buprestidae), distributed in Gansu and Sichuan Provinces of China, is a phytophagous pest that feeds on the toxic plant Buddleja. However, the genomic resources of this beetle remain unknown, which impedes the understanding of its ecological adaptations. Consequently, this study presents a complete, well-assembled, and annotated genome of S. kanssuensis. The assembled results indicate a genome size of 312.42 Mb, comprising 206 scaffolds, with an N50 of 34.04 Mb; 98.68% of the assembly sequences were anchored to 11 chromosomes, including one sex chromosome. The genome contains 12,723 protein-coding genes, of which 11,977 have been annotated. BUSCO analysis revealed that the completeness of the chromosome-level genome is 97.9%. This chromosome-level genome provides valuable data for further investigations into detoxification mechanisms, ecological adaptations, population genetics, and the evolution of Buprestidae. |
| format | Article |
| id | doaj-art-4da07426e95240feafd4b9f743420ba4 |
| institution | DOAJ |
| issn | 2052-4463 |
| language | English |
| publishDate | 2025-05-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Scientific Data |
| spelling | doaj-art-4da07426e95240feafd4b9f743420ba42025-08-20T03:22:00ZengNature PortfolioScientific Data2052-44632025-05-011211710.1038/s41597-025-05271-7Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae)Zhonghua Wei0Yunchun Li1Yingying Li2Jiuzhou Liu3Shuangmei Ding4Xulong Chen5Aimin Shi6Ding Yang7College of Life Sciences, China West Normal UniversityCollege of Life Sciences, China West Normal UniversityCollege of Life Sciences, China West Normal UniversityState Key Laboratory of Agricultural and Forestry Biosecurity, MARA Key Lab of Surveillance and Management for Plant Quarantine Pests, College of Plant Protection, China Agricultural UniversityThe Institute of Scientific and Technical Research on Archives, National Archives Administration of ChinaState Key Laboratory of Green Pesticides, Guizhou UniversityCollege of Life Sciences, China West Normal UniversityState Key Laboratory of Green Pesticides, Guizhou UniversityAbstract Sambus kanssuensis Ganglbauer, 1890 (Coleoptera: Buprestidae), distributed in Gansu and Sichuan Provinces of China, is a phytophagous pest that feeds on the toxic plant Buddleja. However, the genomic resources of this beetle remain unknown, which impedes the understanding of its ecological adaptations. Consequently, this study presents a complete, well-assembled, and annotated genome of S. kanssuensis. The assembled results indicate a genome size of 312.42 Mb, comprising 206 scaffolds, with an N50 of 34.04 Mb; 98.68% of the assembly sequences were anchored to 11 chromosomes, including one sex chromosome. The genome contains 12,723 protein-coding genes, of which 11,977 have been annotated. BUSCO analysis revealed that the completeness of the chromosome-level genome is 97.9%. This chromosome-level genome provides valuable data for further investigations into detoxification mechanisms, ecological adaptations, population genetics, and the evolution of Buprestidae.https://doi.org/10.1038/s41597-025-05271-7 |
| spellingShingle | Zhonghua Wei Yunchun Li Yingying Li Jiuzhou Liu Shuangmei Ding Xulong Chen Aimin Shi Ding Yang Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae) Scientific Data |
| title | Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae) |
| title_full | Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae) |
| title_fullStr | Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae) |
| title_full_unstemmed | Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae) |
| title_short | Chromosome-level genome assembly of Sambus kanssuensis (Coleoptera: Buprestidae) |
| title_sort | chromosome level genome assembly of sambus kanssuensis coleoptera buprestidae |
| url | https://doi.org/10.1038/s41597-025-05271-7 |
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