Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study

Abstract Iron surface determinant B (IsdB), a Staphylococcus aureus (SA) surface protein involved in both heme iron acquisition from host hemoglobin (Hb) and bacterial adhesion, is a proven virulence factor that can be targeted for the design of antibacterial molecules or vaccines. Recent single-mol...

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Main Authors: Francesca Pancrazi, Omar De Bei, Francesco Lavecchia di Tocco, Marialaura Marchetti, Barbara Campanini, Salvatore Cannistraro, Stefano Bettati, Anna Rita Bizzarri
Format: Article
Language:English
Published: Springer 2025-02-01
Series:Discover Nano
Online Access:https://doi.org/10.1186/s11671-025-04182-1
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author Francesca Pancrazi
Omar De Bei
Francesco Lavecchia di Tocco
Marialaura Marchetti
Barbara Campanini
Salvatore Cannistraro
Stefano Bettati
Anna Rita Bizzarri
author_facet Francesca Pancrazi
Omar De Bei
Francesco Lavecchia di Tocco
Marialaura Marchetti
Barbara Campanini
Salvatore Cannistraro
Stefano Bettati
Anna Rita Bizzarri
author_sort Francesca Pancrazi
collection DOAJ
description Abstract Iron surface determinant B (IsdB), a Staphylococcus aureus (SA) surface protein involved in both heme iron acquisition from host hemoglobin (Hb) and bacterial adhesion, is a proven virulence factor that can be targeted for the design of antibacterial molecules or vaccines. Recent single-molecule experiments on IsdB interaction with cell adhesion factors revealed an increase of the complex lifetime upon applying a stronger force (catch bond); this was suggested to favor host invasion under shear stress. An increased bond strength under mechanical stress was also detected by Atomic Force Spectroscopy (AFS) for the interaction between IsdB and Hb. Structural information on the underlying molecular mechanisms at the basis of this behaviour in IsdB-based complexes is missing. Here, we show that the single point mutation of Pro173 in the IsdB domain responsible for Hb binding, which weakens the IsdB:Hb interaction without hampering heme extraction, totally abolishes the previously observed behavior. Remarkably, Pro173 does not directly interact with Hb, but undergoes cis–trans isomerization upon IsdB:Hb complex formation, coupled to folding-upon binding of the corresponding protein loop. Our results suggest that these events might represent the molecular basis for the stress-dependence of bond strength observed for wild type IsdB, shedding light on the mechanisms that govern the capability of SA to infect host cells.
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issn 2731-9229
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spelling doaj-art-4be48e8e896443869ac8ed2091f1d4f52025-02-09T12:51:18ZengSpringerDiscover Nano2731-92292025-02-0120111010.1186/s11671-025-04182-1Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy studyFrancesca Pancrazi0Omar De Bei1Francesco Lavecchia di Tocco2Marialaura Marchetti3Barbara Campanini4Salvatore Cannistraro5Stefano Bettati6Anna Rita Bizzarri7Biophysics and Nanoscience Centre, DEB, Università della Tuscia, Largo dell’UniversitàDepartment of Medicine and Surgery, University of ParmaBiophysics and Nanoscience Centre, DEB, Università della Tuscia, Largo dell’UniversitàDepartment of Medicine and Surgery, University of ParmaDepartment of Food and Drug, University of ParmaBiophysics and Nanoscience Centre, DEB, Università della Tuscia, Largo dell’UniversitàDepartment of Medicine and Surgery, University of ParmaBiophysics and Nanoscience Centre, DEB, Università della Tuscia, Largo dell’UniversitàAbstract Iron surface determinant B (IsdB), a Staphylococcus aureus (SA) surface protein involved in both heme iron acquisition from host hemoglobin (Hb) and bacterial adhesion, is a proven virulence factor that can be targeted for the design of antibacterial molecules or vaccines. Recent single-molecule experiments on IsdB interaction with cell adhesion factors revealed an increase of the complex lifetime upon applying a stronger force (catch bond); this was suggested to favor host invasion under shear stress. An increased bond strength under mechanical stress was also detected by Atomic Force Spectroscopy (AFS) for the interaction between IsdB and Hb. Structural information on the underlying molecular mechanisms at the basis of this behaviour in IsdB-based complexes is missing. Here, we show that the single point mutation of Pro173 in the IsdB domain responsible for Hb binding, which weakens the IsdB:Hb interaction without hampering heme extraction, totally abolishes the previously observed behavior. Remarkably, Pro173 does not directly interact with Hb, but undergoes cis–trans isomerization upon IsdB:Hb complex formation, coupled to folding-upon binding of the corresponding protein loop. Our results suggest that these events might represent the molecular basis for the stress-dependence of bond strength observed for wild type IsdB, shedding light on the mechanisms that govern the capability of SA to infect host cells.https://doi.org/10.1186/s11671-025-04182-1
spellingShingle Francesca Pancrazi
Omar De Bei
Francesco Lavecchia di Tocco
Marialaura Marchetti
Barbara Campanini
Salvatore Cannistraro
Stefano Bettati
Anna Rita Bizzarri
Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study
Discover Nano
title Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study
title_full Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study
title_fullStr Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study
title_full_unstemmed Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study
title_short Proline isomerization modulates the bacterial IsdB/hemoglobin interaction: an atomic force spectroscopy study
title_sort proline isomerization modulates the bacterial isdb hemoglobin interaction an atomic force spectroscopy study
url https://doi.org/10.1186/s11671-025-04182-1
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