Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.

Bay-scale empirical evaluations of how bivalve aquaculture alters plankton composition, and subsequently ecological functioning and higher trophic levels, are lacking. Temporal, inter- and within-bay variation in hydrodynamic, environmental, and aquaculture pressure complicate plankton monitoring de...

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Main Authors: Hannah Sharpe, Thomas Guyondet, Jeffrey Barrell, Claude Belzile, Christopher W McKindsey, Flora Salvo, Anaïs Lacoursière-Roussel
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2024-01-01
Series:PLoS ONE
Online Access:https://doi.org/10.1371/journal.pone.0313271
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author Hannah Sharpe
Thomas Guyondet
Jeffrey Barrell
Claude Belzile
Christopher W McKindsey
Flora Salvo
Anaïs Lacoursière-Roussel
author_facet Hannah Sharpe
Thomas Guyondet
Jeffrey Barrell
Claude Belzile
Christopher W McKindsey
Flora Salvo
Anaïs Lacoursière-Roussel
author_sort Hannah Sharpe
collection DOAJ
description Bay-scale empirical evaluations of how bivalve aquaculture alters plankton composition, and subsequently ecological functioning and higher trophic levels, are lacking. Temporal, inter- and within-bay variation in hydrodynamic, environmental, and aquaculture pressure complicate plankton monitoring design to detect bay-scale changes and inform aquaculture ecosystem interactions. Here, we used flow cytometry to investigate spatio-temporal variations in bacteria and phytoplankton (< 20 μm) composition in four bivalve aquaculture embayments. We observed higher abundances of bacteria and phytoplankton in shallow embayments that experienced greater freshwater and nutrient inputs. Depleted nutrient conditions may have led to the dominance of picophytoplankton cells, which showed strong within-bay variation as a function of riverine vs marine influence and nutrient availability. Although environmental forcings appeared to be a strong driver of spatio-temporal trends, results showed that bivalve aquaculture may reduce near-lease phytoplankton abundance and favor bacterial growth. We discuss confounding environmental factors that must be accounted for when interpreting aquaculture effects such as grazing, benthic-pelagic coupling processes, and microbial biogeochemical cycling. Conclusions provide guidance on sampling considerations using flow cytometry in aquaculture sites based on embayment geomorphology and hydrodynamics.
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spelling doaj-art-4b4e20a362674686a24d4b7dc31ff80e2025-08-20T02:12:42ZengPublic Library of Science (PLoS)PLoS ONE1932-62032024-01-011911e031327110.1371/journal.pone.0313271Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.Hannah SharpeThomas GuyondetJeffrey BarrellClaude BelzileChristopher W McKindseyFlora SalvoAnaïs Lacoursière-RousselBay-scale empirical evaluations of how bivalve aquaculture alters plankton composition, and subsequently ecological functioning and higher trophic levels, are lacking. Temporal, inter- and within-bay variation in hydrodynamic, environmental, and aquaculture pressure complicate plankton monitoring design to detect bay-scale changes and inform aquaculture ecosystem interactions. Here, we used flow cytometry to investigate spatio-temporal variations in bacteria and phytoplankton (< 20 μm) composition in four bivalve aquaculture embayments. We observed higher abundances of bacteria and phytoplankton in shallow embayments that experienced greater freshwater and nutrient inputs. Depleted nutrient conditions may have led to the dominance of picophytoplankton cells, which showed strong within-bay variation as a function of riverine vs marine influence and nutrient availability. Although environmental forcings appeared to be a strong driver of spatio-temporal trends, results showed that bivalve aquaculture may reduce near-lease phytoplankton abundance and favor bacterial growth. We discuss confounding environmental factors that must be accounted for when interpreting aquaculture effects such as grazing, benthic-pelagic coupling processes, and microbial biogeochemical cycling. Conclusions provide guidance on sampling considerations using flow cytometry in aquaculture sites based on embayment geomorphology and hydrodynamics.https://doi.org/10.1371/journal.pone.0313271
spellingShingle Hannah Sharpe
Thomas Guyondet
Jeffrey Barrell
Claude Belzile
Christopher W McKindsey
Flora Salvo
Anaïs Lacoursière-Roussel
Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.
PLoS ONE
title Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.
title_full Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.
title_fullStr Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.
title_full_unstemmed Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.
title_short Monitoring bay-scale ecosystem changes in bivalve aquaculture embayments using flow cytometry.
title_sort monitoring bay scale ecosystem changes in bivalve aquaculture embayments using flow cytometry
url https://doi.org/10.1371/journal.pone.0313271
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