Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia

Abalone, herbivorous marine mollusks of significant economic and ecological importance, exhibit considerable morphological plasticity. This poses a challenge for accurate species identification, which in turn could undermine the assessment of impacts from harvesting. The present study employed an in...

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Main Authors: Nur-Syahirah Mamat, Yuzine Esa, Julia D. Sigwart, Siti-Azizah Mohd Nor, Nur Leena W. S. Wong, Nazia Abdul Kadar, Fabrizio Marcondes Machado, Siti Amalia Aisyah Abdul-Halim, Ahmad Ammar Akhyar Aminarrashid
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-06-01
Series:Frontiers in Marine Science
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Online Access:https://www.frontiersin.org/articles/10.3389/fmars.2025.1577263/full
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author Nur-Syahirah Mamat
Nur-Syahirah Mamat
Yuzine Esa
Yuzine Esa
Julia D. Sigwart
Julia D. Sigwart
Siti-Azizah Mohd Nor
Nur Leena W. S. Wong
Nur Leena W. S. Wong
Nazia Abdul Kadar
Fabrizio Marcondes Machado
Siti Amalia Aisyah Abdul-Halim
Ahmad Ammar Akhyar Aminarrashid
author_facet Nur-Syahirah Mamat
Nur-Syahirah Mamat
Yuzine Esa
Yuzine Esa
Julia D. Sigwart
Julia D. Sigwart
Siti-Azizah Mohd Nor
Nur Leena W. S. Wong
Nur Leena W. S. Wong
Nazia Abdul Kadar
Fabrizio Marcondes Machado
Siti Amalia Aisyah Abdul-Halim
Ahmad Ammar Akhyar Aminarrashid
author_sort Nur-Syahirah Mamat
collection DOAJ
description Abalone, herbivorous marine mollusks of significant economic and ecological importance, exhibit considerable morphological plasticity. This poses a challenge for accurate species identification, which in turn could undermine the assessment of impacts from harvesting. The present study employed an integrative approach combining geometric morphometrics and DNA barcoding to address potential taxonomic ambiguities in abalone populations from Sabah, Malaysia. Especially in this megadiverse region, it could be expected that multiple species may co-occur. Morphometric analysis of 135 specimens, using 14 shell landmarks, confirmed that all individuals clustered within the Haliotis asinina group when compared with data from Haliotis glabra. This was supported by genetic analyses, which demonstrated 99% sequence similarity among novel CO1 sequences and previously published DNA barcodes from H. asinina. Despite overlapping morphological traits between H. asinina and similar congeners, the integrative approach conclusively identified all specimens as H. asinina. Although there are some limits to shell-based taxonomy, quantitative approaches to both morphological and genetic data can resolve species boundaries. These results underscore the importance of employing integrative methods in biodiversity assessments and conservation strategies for tropical abalone species.
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language English
publishDate 2025-06-01
publisher Frontiers Media S.A.
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series Frontiers in Marine Science
spelling doaj-art-49a6e9b952864fbe8b363c9be67551082025-08-20T03:45:44ZengFrontiers Media S.A.Frontiers in Marine Science2296-77452025-06-011210.3389/fmars.2025.15772631577263Combining shells and sequences to untangle taxonomy of abalone in Sabah, MalaysiaNur-Syahirah Mamat0Nur-Syahirah Mamat1Yuzine Esa2Yuzine Esa3Julia D. Sigwart4Julia D. Sigwart5Siti-Azizah Mohd Nor6Nur Leena W. S. Wong7Nur Leena W. S. Wong8Nazia Abdul Kadar9Fabrizio Marcondes Machado10Siti Amalia Aisyah Abdul-Halim11Ahmad Ammar Akhyar Aminarrashid12International Institute of Aquaculture and Aquatic Sciences (I-AQUAS), Universiti Putra Malaysia, Port Dickson, Negeri Sembilan, MalaysiaDepartment of Marine Zoology, Senckenberg Research Institute and Museum, Frankfurt, GermanyInternational Institute of Aquaculture and Aquatic Sciences (I-AQUAS), Universiti Putra Malaysia, Port Dickson, Negeri Sembilan, MalaysiaDepartment of Aquaculture, Faculty of Agriculture, Universiti Putra Malaysia, UPM Serdang, Selangor, MalaysiaDepartment of Marine Zoology, Senckenberg Research Institute and Museum, Frankfurt, GermanyQueen’s University Belfast, Marine Laboratory, Portaferry, Northern Ireland, United KingdomInstitute of Climate Adaptation and Marine Biotechnology (ICAMB), Universiti Malaysia Terengganu, Kuala Nerus, Terengganu, MalaysiaInternational Institute of Aquaculture and Aquatic Sciences (I-AQUAS), Universiti Putra Malaysia, Port Dickson, Negeri Sembilan, MalaysiaDepartment of Aquaculture, Faculty of Agriculture, Universiti Putra Malaysia, UPM Serdang, Selangor, MalaysiaBorneo Marine Research Institute, Universiti Malaysia Sabah, Kota Kinabalu, Sabah, MalaysiaDepartamento de Biologia Animal, Universidade Estadual de Campinas (UNICAMP), São Paulo, BrazilDepartment of Aquaculture, Faculty of Agriculture, Universiti Putra Malaysia, UPM Serdang, Selangor, MalaysiaDepartment of Aquaculture, Faculty of Agriculture, Universiti Putra Malaysia, UPM Serdang, Selangor, MalaysiaAbalone, herbivorous marine mollusks of significant economic and ecological importance, exhibit considerable morphological plasticity. This poses a challenge for accurate species identification, which in turn could undermine the assessment of impacts from harvesting. The present study employed an integrative approach combining geometric morphometrics and DNA barcoding to address potential taxonomic ambiguities in abalone populations from Sabah, Malaysia. Especially in this megadiverse region, it could be expected that multiple species may co-occur. Morphometric analysis of 135 specimens, using 14 shell landmarks, confirmed that all individuals clustered within the Haliotis asinina group when compared with data from Haliotis glabra. This was supported by genetic analyses, which demonstrated 99% sequence similarity among novel CO1 sequences and previously published DNA barcodes from H. asinina. Despite overlapping morphological traits between H. asinina and similar congeners, the integrative approach conclusively identified all specimens as H. asinina. Although there are some limits to shell-based taxonomy, quantitative approaches to both morphological and genetic data can resolve species boundaries. These results underscore the importance of employing integrative methods in biodiversity assessments and conservation strategies for tropical abalone species.https://www.frontiersin.org/articles/10.3389/fmars.2025.1577263/fullabalonemarine gastropodsmolluskintegrative taxonomymorphometricsgenetic analysis
spellingShingle Nur-Syahirah Mamat
Nur-Syahirah Mamat
Yuzine Esa
Yuzine Esa
Julia D. Sigwart
Julia D. Sigwart
Siti-Azizah Mohd Nor
Nur Leena W. S. Wong
Nur Leena W. S. Wong
Nazia Abdul Kadar
Fabrizio Marcondes Machado
Siti Amalia Aisyah Abdul-Halim
Ahmad Ammar Akhyar Aminarrashid
Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia
Frontiers in Marine Science
abalone
marine gastropods
mollusk
integrative taxonomy
morphometrics
genetic analysis
title Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia
title_full Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia
title_fullStr Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia
title_full_unstemmed Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia
title_short Combining shells and sequences to untangle taxonomy of abalone in Sabah, Malaysia
title_sort combining shells and sequences to untangle taxonomy of abalone in sabah malaysia
topic abalone
marine gastropods
mollusk
integrative taxonomy
morphometrics
genetic analysis
url https://www.frontiersin.org/articles/10.3389/fmars.2025.1577263/full
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