Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis)
Abstract We assembled a chromosome-level genome of Chinese native ‘Wanfeng’ almond, with a size of 288.53 Mb and a contig N50 of 30.48 Mb. Approximately 270 Mb (93.58%) of the sequences are anchored on 8 Superscaffolds, and 174.59 Mb (60.51%) of the sequences are repetitive sequences. BUSCO assessme...
Saved in:
| Main Authors: | , , , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
Nature Portfolio
2025-01-01
|
| Series: | Scientific Data |
| Online Access: | https://doi.org/10.1038/s41597-025-04480-4 |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1832571993367511040 |
|---|---|
| author | Dongdong Zhang Zhenfan Yu Xingyue Liu Yong Li Bin Zeng Lirong Wang |
| author_facet | Dongdong Zhang Zhenfan Yu Xingyue Liu Yong Li Bin Zeng Lirong Wang |
| author_sort | Dongdong Zhang |
| collection | DOAJ |
| description | Abstract We assembled a chromosome-level genome of Chinese native ‘Wanfeng’ almond, with a size of 288.53 Mb and a contig N50 of 30.48 Mb. Approximately 270 Mb (93.58%) of the sequences are anchored on 8 Superscaffolds, and 174.59 Mb (60.51%) of the sequences are repetitive sequences. BUSCO assessment revealed that the ‘Wanfeng’ almond genome assembly included 99.3% complete BUSCOs. A total of 24,230 protein-coding genes were annotated, and 24,033 were functional. The assembly of the ‘Wanfeng’ almond genome provides a valuable genetic resource for molecular breeding of native almonds in China. |
| format | Article |
| id | doaj-art-45cf4a8c761e46999fcf54836021c785 |
| institution | Kabale University |
| issn | 2052-4463 |
| language | English |
| publishDate | 2025-01-01 |
| publisher | Nature Portfolio |
| record_format | Article |
| series | Scientific Data |
| spelling | doaj-art-45cf4a8c761e46999fcf54836021c7852025-02-02T12:08:09ZengNature PortfolioScientific Data2052-44632025-01-011211810.1038/s41597-025-04480-4Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis)Dongdong Zhang0Zhenfan Yu1Xingyue Liu2Yong Li3Bin Zeng4Lirong Wang5College of Horticulture, Xinjiang Agricultural UniversityCollege of Horticulture, Xinjiang Agricultural UniversityCollege of Horticulture, Xinjiang Agricultural UniversityWestern Research Institute, CAASCollege of Horticulture, Xinjiang Agricultural UniversityWestern Research Institute, CAASAbstract We assembled a chromosome-level genome of Chinese native ‘Wanfeng’ almond, with a size of 288.53 Mb and a contig N50 of 30.48 Mb. Approximately 270 Mb (93.58%) of the sequences are anchored on 8 Superscaffolds, and 174.59 Mb (60.51%) of the sequences are repetitive sequences. BUSCO assessment revealed that the ‘Wanfeng’ almond genome assembly included 99.3% complete BUSCOs. A total of 24,230 protein-coding genes were annotated, and 24,033 were functional. The assembly of the ‘Wanfeng’ almond genome provides a valuable genetic resource for molecular breeding of native almonds in China.https://doi.org/10.1038/s41597-025-04480-4 |
| spellingShingle | Dongdong Zhang Zhenfan Yu Xingyue Liu Yong Li Bin Zeng Lirong Wang Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis) Scientific Data |
| title | Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis) |
| title_full | Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis) |
| title_fullStr | Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis) |
| title_full_unstemmed | Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis) |
| title_short | Chromosome level genome assembly of ‘Wanfeng’ almond (Prunus dulcis) |
| title_sort | chromosome level genome assembly of wanfeng almond prunus dulcis |
| url | https://doi.org/10.1038/s41597-025-04480-4 |
| work_keys_str_mv | AT dongdongzhang chromosomelevelgenomeassemblyofwanfengalmondprunusdulcis AT zhenfanyu chromosomelevelgenomeassemblyofwanfengalmondprunusdulcis AT xingyueliu chromosomelevelgenomeassemblyofwanfengalmondprunusdulcis AT yongli chromosomelevelgenomeassemblyofwanfengalmondprunusdulcis AT binzeng chromosomelevelgenomeassemblyofwanfengalmondprunusdulcis AT lirongwang chromosomelevelgenomeassemblyofwanfengalmondprunusdulcis |