Scifer: An R/Bioconductor package for large-scale integration of Sanger sequencing and flow cytometry data of index-sorted single cells

Scifer: An R/Bioconductor package for large-scale integration of Sanger sequencing and flow cytometry data of index-sorted single cells

Sanger sequencing remains widely used in various experimental contexts, often in combination with flow cytometry for indexing specific cell populations. However, existing software lacks the capability to automate quality control (QC) of raw Sanger sequencing data and integrate it with flow cytometry...

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Bibliographic Details
Main Authors: Rodrigo Arcoverde Cerveira, Klara Lenart, Marcel Martin, Matthew James Hinchcliff, Fredrika Hellgren, Kewei Ye, Juliana Assis Geraldo, Taras Kreslavsky, Sebastian Ols, Karin Loré
Format: Article
Language:English
Published: Elsevier 2024-12-01
Series:ImmunoInformatics
Subjects:
R package
Bioconductor
Data integration
Sanger sequencing
Flow cytometry
Quality control
Online Access:http://www.sciencedirect.com/science/article/pii/S2667119024000168
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