World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens
Freshwater crayfish are amongst the largest macroinvertebrates and play a keystone role in the ecosystems they occupy. Understanding the global distribution of these animals is often hindered due to a paucity of distributional data. Additionally, non-native crayfish introductions are becoming more f...
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2024-10-01
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| author | Mihaela C. Ion Caitlin C. Bloomer Tudor I. Bărăscu Francisco J. Oficialdegui Nathaniel F. Shoobs Bronwyn W. Williams Kevin Scheers Miguel Clavero Frédéric Grandjean Marc Collas Thomas Baudry Zachary Loughman Jeremy J. Wright Timo J. Ruokonen Christoph Chucholl Simone Guareschi Bram Koese Zsombor M. Banyai James Hodson Margo Hurt Katrin Kaldre Boris Lipták James W. Fetzner Tommaso Cancellario András Weiperth Jạnis Birzaks Teodora Trichkova Milcho Todorov Maksims Balalaikins Bogna Griffin Olga N. Petko Ada Acevedo-Alonso Guillermo D’Elía Karolina Śliwińska Anatoly Alekhnovich Henry Choong Josie South Nick Whiterod Katarina Zorić Peter Haase Ismael Soto Daniel J. Brady Phillip J. Haubrock Pedro J. Torres Denis Şadrin Pavel Vlach Cüneyt Kaya Sang Woo Jung Jin-Young Kim Xavier H.C. Vermeersch Maciej Bonk Radu Guiaşu Muzaffer M. Harlioğlu Jane Devlin Irmak Kurtul Dagmara Błońska Pieter Boets Hossein Masigol Paul R. Cabe Japo Jussila Trude Vrålstad David V. Beresford Scott M. Reid Jiří Patoka David A. Strand Ali S. Tarkan Frédérique Steen Thomas Abeel Matthew Harwood Samuel Auer Sandor Kelly Ioannis A. Giantsis Rafał Maciaszek Maria V. Alvanou Önder Aksu David M. Hayes Tadashi Kawai Elena Tricarico Adroit Chakandinakira Zanethia C. Barnett Ştefan G. Kudor Andreea E. Beda Lucian Vîlcea Alexandru E. Mizeranschi Marian Neagul Anton Licz Andra D. Cotoarbă Adam Petrusek Antonín Kouba Christopher A. Taylor Lucian Pârvulescu |
| author_facet | Mihaela C. Ion Caitlin C. Bloomer Tudor I. Bărăscu Francisco J. Oficialdegui Nathaniel F. Shoobs Bronwyn W. Williams Kevin Scheers Miguel Clavero Frédéric Grandjean Marc Collas Thomas Baudry Zachary Loughman Jeremy J. Wright Timo J. Ruokonen Christoph Chucholl Simone Guareschi Bram Koese Zsombor M. Banyai James Hodson Margo Hurt Katrin Kaldre Boris Lipták James W. Fetzner Tommaso Cancellario András Weiperth Jạnis Birzaks Teodora Trichkova Milcho Todorov Maksims Balalaikins Bogna Griffin Olga N. Petko Ada Acevedo-Alonso Guillermo D’Elía Karolina Śliwińska Anatoly Alekhnovich Henry Choong Josie South Nick Whiterod Katarina Zorić Peter Haase Ismael Soto Daniel J. Brady Phillip J. Haubrock Pedro J. Torres Denis Şadrin Pavel Vlach Cüneyt Kaya Sang Woo Jung Jin-Young Kim Xavier H.C. Vermeersch Maciej Bonk Radu Guiaşu Muzaffer M. Harlioğlu Jane Devlin Irmak Kurtul Dagmara Błońska Pieter Boets Hossein Masigol Paul R. Cabe Japo Jussila Trude Vrålstad David V. Beresford Scott M. Reid Jiří Patoka David A. Strand Ali S. Tarkan Frédérique Steen Thomas Abeel Matthew Harwood Samuel Auer Sandor Kelly Ioannis A. Giantsis Rafał Maciaszek Maria V. Alvanou Önder Aksu David M. Hayes Tadashi Kawai Elena Tricarico Adroit Chakandinakira Zanethia C. Barnett Ştefan G. Kudor Andreea E. Beda Lucian Vîlcea Alexandru E. Mizeranschi Marian Neagul Anton Licz Andra D. Cotoarbă Adam Petrusek Antonín Kouba Christopher A. Taylor Lucian Pârvulescu |
| author_sort | Mihaela C. Ion |
| collection | DOAJ |
| description | Freshwater crayfish are amongst the largest macroinvertebrates and play a keystone role in the ecosystems they occupy. Understanding the global distribution of these animals is often hindered due to a paucity of distributional data. Additionally, non-native crayfish introductions are becoming more frequent, which can cause severe environmental and economic impacts. Management decisions related to crayfish and their habitats require accurate, up-to-date distribution data and mapping tools. Such data are currently patchily distributed with limited accessibility and are rarely up-to-date. To address these challenges, we developed a versatile e-portal to host distributional data of freshwater crayfish and their pathogens (using Aphanomyces astaci, the causative agent of the crayfish plague, as the most prominent example). Populated with expert data and operating in near real-time, World of Crayfish™ is a living, publicly available database providing worldwide distributional data sourced by experts in the field. The database offers open access to the data through specialized standard geospatial services (Web Map Service, Web Feature Service) enabling users to view, embed, and download customizable outputs for various applications. The platform is designed to support technical enhancements in the future, with the potential to eventually incorporate various additional features. This tool serves as a step forward towards a modern era of conservation planning and management of freshwater biodiversity. |
| format | Article |
| id | doaj-art-3f7985e4eb614ff08e77d8b3b373acc1 |
| institution | OA Journals |
| issn | 2167-8359 |
| language | English |
| publishDate | 2024-10-01 |
| publisher | PeerJ Inc. |
| record_format | Article |
| series | PeerJ |
| spelling | doaj-art-3f7985e4eb614ff08e77d8b3b373acc12025-08-20T02:15:11ZengPeerJ Inc.PeerJ2167-83592024-10-0112e1822910.7717/peerj.18229World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogensMihaela C. Ion0Caitlin C. Bloomer1Tudor I. Bărăscu2Francisco J. Oficialdegui3Nathaniel F. Shoobs4Bronwyn W. Williams5Kevin Scheers6Miguel Clavero7Frédéric Grandjean8Marc Collas9Thomas Baudry10Zachary Loughman11Jeremy J. Wright12Timo J. Ruokonen13Christoph Chucholl14 Simone Guareschi15Bram Koese16Zsombor M. Banyai17James Hodson18Margo Hurt19Katrin Kaldre20Boris Lipták21James W. Fetzner22Tommaso Cancellario23András Weiperth24Jạnis Birzaks25Teodora Trichkova26Milcho Todorov27Maksims Balalaikins28Bogna Griffin29Olga N. Petko30Ada Acevedo-Alonso31Guillermo D’Elía32Karolina Śliwińska33Anatoly Alekhnovich34Henry Choong35Josie South36Nick Whiterod37Katarina Zorić38Peter Haase39Ismael Soto40Daniel J. Brady41Phillip J. Haubrock42Pedro J. Torres43Denis Şadrin44Pavel Vlach45Cüneyt Kaya46Sang Woo Jung47Jin-Young Kim48Xavier H.C. Vermeersch49Maciej Bonk50Radu Guiaşu51Muzaffer M. Harlioğlu52Jane Devlin53Irmak Kurtul54Dagmara Błońska55Pieter Boets56Hossein Masigol57Paul R. Cabe58Japo Jussila59Trude Vrålstad60David V. Beresford61Scott M. Reid62Jiří Patoka63David A. Strand64Ali S. Tarkan65Frédérique Steen66Thomas Abeel67Matthew Harwood68Samuel Auer69Sandor Kelly70Ioannis A. Giantsis71Rafał Maciaszek72Maria V. Alvanou73Önder Aksu74David M. Hayes75Tadashi Kawai76Elena Tricarico77Adroit Chakandinakira78Zanethia C. Barnett79Ştefan G. Kudor80Andreea E. Beda81Lucian Vîlcea82Alexandru E. Mizeranschi83Marian Neagul84Anton Licz85Andra D. Cotoarbă86Adam Petrusek87Antonín Kouba88Christopher A. Taylor89Lucian Pârvulescu90Institute of Biology Bucharest, Romanian Academy, Bucharest, RomaniaIllinois Natural History Survey, Prairie Research Institute, Champaign, IL, United States of AmericaQtibia Engineering, Râmnicu-Vâlcea, RomaniaFaculty of Fisheries and Protection of Waters, South Bohemian Research Centre of Aquaculture and Biodiversity of Hydrocenoses, University of South Bohemia in České Budějovice, Vodňany, Czech RepublicMuseum of Biological Diversity, Department of Evolution, Ecology, and Organismal Biology, The Ohio State University, Columbus, OH, United States of AmericaResearch Laboratory, North Carolina Museum of Natural Sciences, Raleigh, NC, United States of AmericaUnit Freshwater habitats, Research Institute for Nature and Forest, Brussels, BelgiumEstación Biológica de Doñana–CSIC, Sevilla, SpainLaboratoire Ecologie et Biologie des Interactions - UMR CNRS 7267, Laboratoire EBI - Equipe Ecologie Evolution Symbiose - Batiment B31, Université de Poitiers, Poitiers, FranceOffice Français de la Biodiversité, Epinal, FranceLaboratoire Ecologie et Biologie des Interactions - UMR CNRS 7267, Laboratoire EBI - Equipe Ecologie Evolution Symbiose - Batiment B31, Université de Poitiers, Poitiers, FranceDepartment of Organismal Biology, Ecology, and Zoo Science, West Liberty University, West Liberty, WV, United States of AmericaNew York State Museum, Albany, NY, United States of AmericaNatural Resources Institute Finland, Jyväskylä, FinlandFisheries Research Station Baden-Württemberg, Langenargen, GermanyDepartment of Life Sciences and Systems Biology, University of Turin, Turin, ItalyNaturalis Biodiversity Center, Leiden, NetherlandsDoctoral School of Environmental Science, Hungarian University of Agriculture and Life Sciences, Gödöllő, HungarySchool of Biology, Faculty of Biological Science, University of Leeds, Leeds, United KingdomChair of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, EstoniaChair of Aquaculture, Institute of Veterinary Medicine and Animal Sciences, Estonian University of Life Sciences, Tartu, EstoniaFaculty of Fisheries and Protection of Waters, South Bohemian Research Centre of Aquaculture and Biodiversity of Hydrocenoses, University of South Bohemia in České Budějovice, Vodňany, Czech RepublicSection of Invertebrate Zoology, Carnegie Museum of Natural History, Pittsburgh, PA, United States of AmericaBalearic Biodiversity Centre, Department of Biology, University of the Balearic Islands, Palma, SpainDepartment of Systematic Zoology and Ecology, Eötvös Loránd University, Budapest, HungaryInstitute of Life Sciences and Technology, Department of Biodiversity, Daugavpils University, Daugavpils, LatviaInstitute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Sofia, BulgariaInstitute of Biodiversity and Ecosystem Research, Bulgarian Academy of Sciences, Sofia, BulgariaInstitute of Life Sciences and Technology, Department of Biodiversity, Daugavpils University, Daugavpils, LatviaFish Health Unit, Marine Institute, Galway, IrelandCrayfish Research Centre, Institute for Advanced Environmental Research, West University of Timisoara, Timisoara, RomaniaIndependent Researcher, Tunja-Boyacá, ColombiaInstituto de Ciencias Ambientales y Evolutivas, Universidad Austral de Chile, Valdivia, ChileScientific and Practical Center for Biological Resources of the National Academy of Science of Belarus, Minsk, BelarusScientific and Practical Center for Biological Resources of the National Academy of Science of Belarus, Minsk, BelarusRoyal British Columbia Museum, Victoria, British Columbia, CanadaSouth African Institute for Aquatic Biodiversity, Makhanda, South AfricaNature Glenelg Trust, South Australia, AustraliaDepartment of Hydroecology and Water Protection, Institute for Biological Research “Siniša Stanković”, National Institute of the Republic of Serbia, University of Belgrade, Belgrade, SerbiaFaculty of Biology, University of Duisburg-Essen, Essen, GermanyFaculty of Fisheries and Protection of Waters, South Bohemian Research Centre of Aquaculture and Biodiversity of Hydrocenoses, University of South Bohemia in České Budějovice, Vodňany, Czech RepublicBranch for Bioresources, Fraunhofer Institute for Molecular Biology and Applied Ecology, Gießen, GermanyFaculty of Fisheries and Protection of Waters, South Bohemian Research Centre of Aquaculture and Biodiversity of Hydrocenoses, University of South Bohemia in České Budějovice, Vodňany, Czech RepublicBiology Department, College of the Holy Cross, Worcester, MA, United States of AmericaCrayfish Research Centre, Institute for Advanced Environmental Research, West University of Timisoara, Timisoara, RomaniaCenter of Biology, Geosciences and Environmental Education, Faculty of Education, University of West Bohemia, Plzeň, Czech RepublicFaculty of Fisheries, Recep Tayyip Erdogan University, Rize, TurkeyDASARI Research Institute of BioResources, Daejeon, Republic of KoreaResearch Center for Endangered Species, National Institute of Ecology, Yeongyang, Republic of KoreaDepartment Nature and Biodiversity, Brussels Environment, Brussels, BelgiumInstitute of Nature Conservation, Polish Academy of Sciences, Kraków, PolandBiology Program, Glendon College, York University, Toronto, Ontario, CanadaFisheries Faculty, Fırat University, Elazığ, TurkeyOntario Ministry of Natural Resources, Peterborough, Ontario, CanadaMarine and Inland Waters Sciences and Technology Department, Faculty of Fisheries, Ege University, Izmir, TurkeyDepartment of Ecology and Vertebrate Zoology, Faculty of Biology and Environmental Protection, University of Lodz, Łódź, PolandProvincial Centre of Environmental Research, Ghent, BelgiumCrayfish Research Centre, Institute for Advanced Environmental Research, West University of Timisoara, Timisoara, RomaniaBiology Department, Washington and Lee University, Lexington, VA, United States of AmericaDepartment of Environmental and Biological Sciences, University of Eastern Finland, Kuopio, FinlandDepartment of Aquatic Animal Health, Norwegian Veterinary Institute, Ås, NorwayBiology and Trent School of the Environment, Trent University, Peterborough, Ontario, CanadaOntario Ministry of Natural Resources, Peterborough, Ontario, CanadaDepartment of Zoology and Fisheries, Faculty of Agrobiology, Food and Natural Resources, Czech University of Life Sciences Prague, Prague, Czech RepublicDepartment of Aquatic Animal Health, Norwegian Veterinary Institute, Ås, NorwayDepartment of Ecology and Vertebrate Zoology, Faculty of Biology and Environmental Protection, University of Lodz, Łódź, PolandUnit Freshwater habitats, Research Institute for Nature and Forest, Brussels, BelgiumAgro- and Biotechnology, Odisee University of Applied Sciences, Sint-Niklaas, BelgiumWater@Leeds, School of Biology, Faculty of Biological Sciences, Leeds, United KingdomBlattfisch e.U., Wels, AustriaUniversity of Central Florida, Orlando, FL, United States of AmericaDepartment of Animal Science, Faculty of Agricultural Sciences, University of Western Macedonia, Florina, GreeceDepartment of Animal Genetics and Conservation, Institute of Animal Sciences, Warsaw University of Life Sciences, Warsaw, PolandDepartment of Animal Science, Faculty of Agricultural Sciences, University of Western Macedonia, Florina, GreeceDepartment of Aquaculture of Fisheries Faculty, Munzur University, Tunceli, TurkeyEastern Kentucky University, Richmond, KY, United States of AmericaHokkaido Research Organization, Central Fisheries Research Institute, Yoichi Hokkaido, JapanDipartimento di Biologia, Università di Firenze, Sesto Fiorentino, ItalyLake Kariba Fisheries Research Institute, Zimbabwe Parks and Wildlife Management Authority, Kariba, ZimbabweUSDA Forest Service, Southern Research Station, Center for Bottomland Hardwoods Research, Clemson, SC, United States of America“Simion Mehedinţi - Nature and Sustainable Development” Doctoral School, University of Bucharest, Bucharest, RomaniaDepartment of Computer Science and Information Technology, Faculty of Engineering in Foreign Languages, University Politehnica of Bucharest, Bucharest, RomaniaDepartment of Economic Informatics and Cybernetics, Bucharest University of Economic Studies, Bucharest, RomaniaCrayfish Research Centre, Institute for Advanced Environmental Research, West University of Timisoara, Timisoara, RomaniaCrayfish Research Centre, Institute for Advanced Environmental Research, West University of Timisoara, Timisoara, RomaniaInformation Technology & Communications Department, West University of Timisoara, Timisoara, RomaniaDepartment of Biology, Faculty of Chemistry, Biology, Geography, West University of Timisoara, Timisoara, RomaniaDepartment of Ecology, Faculty of Science, Charles University, Prague, Czech RepublicFaculty of Fisheries and Protection of Waters, South Bohemian Research Centre of Aquaculture and Biodiversity of Hydrocenoses, University of South Bohemia in České Budějovice, Vodňany, Czech RepublicIllinois Natural History Survey, Prairie Research Institute, Champaign, IL, United States of AmericaCrayfish Research Centre, Institute for Advanced Environmental Research, West University of Timisoara, Timisoara, RomaniaFreshwater crayfish are amongst the largest macroinvertebrates and play a keystone role in the ecosystems they occupy. Understanding the global distribution of these animals is often hindered due to a paucity of distributional data. Additionally, non-native crayfish introductions are becoming more frequent, which can cause severe environmental and economic impacts. Management decisions related to crayfish and their habitats require accurate, up-to-date distribution data and mapping tools. Such data are currently patchily distributed with limited accessibility and are rarely up-to-date. To address these challenges, we developed a versatile e-portal to host distributional data of freshwater crayfish and their pathogens (using Aphanomyces astaci, the causative agent of the crayfish plague, as the most prominent example). Populated with expert data and operating in near real-time, World of Crayfish™ is a living, publicly available database providing worldwide distributional data sourced by experts in the field. The database offers open access to the data through specialized standard geospatial services (Web Map Service, Web Feature Service) enabling users to view, embed, and download customizable outputs for various applications. The platform is designed to support technical enhancements in the future, with the potential to eventually incorporate various additional features. This tool serves as a step forward towards a modern era of conservation planning and management of freshwater biodiversity.https://peerj.com/articles/18229.pdfAphanomyces astaciEndangered speciesInvasive speciesOpen dataAstacidaeCambaridae |
| spellingShingle | Mihaela C. Ion Caitlin C. Bloomer Tudor I. Bărăscu Francisco J. Oficialdegui Nathaniel F. Shoobs Bronwyn W. Williams Kevin Scheers Miguel Clavero Frédéric Grandjean Marc Collas Thomas Baudry Zachary Loughman Jeremy J. Wright Timo J. Ruokonen Christoph Chucholl Simone Guareschi Bram Koese Zsombor M. Banyai James Hodson Margo Hurt Katrin Kaldre Boris Lipták James W. Fetzner Tommaso Cancellario András Weiperth Jạnis Birzaks Teodora Trichkova Milcho Todorov Maksims Balalaikins Bogna Griffin Olga N. Petko Ada Acevedo-Alonso Guillermo D’Elía Karolina Śliwińska Anatoly Alekhnovich Henry Choong Josie South Nick Whiterod Katarina Zorić Peter Haase Ismael Soto Daniel J. Brady Phillip J. Haubrock Pedro J. Torres Denis Şadrin Pavel Vlach Cüneyt Kaya Sang Woo Jung Jin-Young Kim Xavier H.C. Vermeersch Maciej Bonk Radu Guiaşu Muzaffer M. Harlioğlu Jane Devlin Irmak Kurtul Dagmara Błońska Pieter Boets Hossein Masigol Paul R. Cabe Japo Jussila Trude Vrålstad David V. Beresford Scott M. Reid Jiří Patoka David A. Strand Ali S. Tarkan Frédérique Steen Thomas Abeel Matthew Harwood Samuel Auer Sandor Kelly Ioannis A. Giantsis Rafał Maciaszek Maria V. Alvanou Önder Aksu David M. Hayes Tadashi Kawai Elena Tricarico Adroit Chakandinakira Zanethia C. Barnett Ştefan G. Kudor Andreea E. Beda Lucian Vîlcea Alexandru E. Mizeranschi Marian Neagul Anton Licz Andra D. Cotoarbă Adam Petrusek Antonín Kouba Christopher A. Taylor Lucian Pârvulescu World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens PeerJ Aphanomyces astaci Endangered species Invasive species Open data Astacidae Cambaridae |
| title | World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens |
| title_full | World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens |
| title_fullStr | World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens |
| title_full_unstemmed | World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens |
| title_short | World of Crayfish™: a web platform towards real-time global mapping of freshwater crayfish and their pathogens |
| title_sort | world of crayfish™ a web platform towards real time global mapping of freshwater crayfish and their pathogens |
| topic | Aphanomyces astaci Endangered species Invasive species Open data Astacidae Cambaridae |
| url | https://peerj.com/articles/18229.pdf |
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