Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells

The expression of intragenic long interspersed nuclear elements 1 (LINE1s) can generate chimeric sequences disrupting host gene transcription. Among these, L1-MET, within mesenchymal epithelial transition (MET) oncogene, is particularly interesting, as its expression has been associated with the acq...

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Main Authors: Umberto Miglio, Enrico Berrino, Daniele Avanzato, Ivan Molineris, Valentina Miano, Melissa Milan, Letizia Lanzetti, Eugenio Morelli, James M. Hughes, Michele De Bortoli, Anna Sapino, Tiziana Venesio
Format: Article
Language:English
Published: Elsevier 2025-06-01
Series:Molecular Therapy: Nucleic Acids
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Online Access:http://www.sciencedirect.com/science/article/pii/S2162253125000836
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author Umberto Miglio
Enrico Berrino
Daniele Avanzato
Ivan Molineris
Valentina Miano
Melissa Milan
Letizia Lanzetti
Eugenio Morelli
James M. Hughes
Michele De Bortoli
Anna Sapino
Tiziana Venesio
author_facet Umberto Miglio
Enrico Berrino
Daniele Avanzato
Ivan Molineris
Valentina Miano
Melissa Milan
Letizia Lanzetti
Eugenio Morelli
James M. Hughes
Michele De Bortoli
Anna Sapino
Tiziana Venesio
author_sort Umberto Miglio
collection DOAJ
description The expression of intragenic long interspersed nuclear elements 1 (LINE1s) can generate chimeric sequences disrupting host gene transcription. Among these, L1-MET, within mesenchymal epithelial transition (MET) oncogene, is particularly interesting, as its expression has been associated with the acquisition of tumorigenic phenotypes and cancer progression. We investigated the effects of targeting L1-MET in eight cancer cell lines derived from breast, lung, and gastrointestinal cancers, as well as in non-transformed human fibroblasts and lymphocytes, using specifically developed modified antisense oligonucleotides. Inhibition of L1-MET resulted in decreased cell viability, increased apoptosis, and gene expression profile reprogramming in cancer cells, including significant downregulation of MET and epidermal growth factor receptor (EGFR) proteins. These effects were related to the L1-MET/MET expression levels and the type of cellular addiction, with pronounced impacts in cells harboring MET gene amplification and EGFR-activating mutations. They were also detectable, though less pronounced, in cancer cells with steady-state levels of MET and EGFR proteins or addiction to other oncogenes. We demonstrate that targeting L1-MET can knockdown MET and EGFR protein. The restricted expression of L1-MET to cancer cells suggests that its inhibition could be an effective strategy to induce death in oncogene-addicted tumor cells and offers a potential means to overcome the limitations of conventional targeted therapies.
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spelling doaj-art-30dce2bac9894d769b4e70b8b6c039312025-08-20T02:27:30ZengElsevierMolecular Therapy: Nucleic Acids2162-25312025-06-0136210252910.1016/j.omtn.2025.102529Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cellsUmberto Miglio0Enrico Berrino1Daniele Avanzato2Ivan Molineris3Valentina Miano4Melissa Milan5Letizia Lanzetti6Eugenio Morelli7James M. Hughes8Michele De Bortoli9Anna Sapino10Tiziana Venesio11Candiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, Italy; Department of Medical Sciences, University of Torino, 10126 Torino, ItalyDepartment of Oncology, University of Torino Medical School, 10043 Orbassano, TO, ItalyDepartment of Life Sciences and System Biology and MBC, University of Torino, 10123 Torino, ItalyDepartment of Clinical and Biological Sciences, University of Torino, 10043 Orbassano, TO, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, Italy; Department of Oncology, University of Torino Medical School, 10043 Orbassano, TO, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, Italy; Department of Oncology, University of Torino Medical School, 10043 Orbassano, TO, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, ItalyDepartment of Clinical and Biological Sciences, University of Torino, 10043 Orbassano, TO, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, Italy; Department of Medical Sciences, University of Torino, 10126 Torino, ItalyCandiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, Italy; Corresponding author: Tiziana Venesio, Candiolo Cancer Institute, FPO-IRCCS, Candiolo, 10060 Candiolo, TO, Italy.The expression of intragenic long interspersed nuclear elements 1 (LINE1s) can generate chimeric sequences disrupting host gene transcription. Among these, L1-MET, within mesenchymal epithelial transition (MET) oncogene, is particularly interesting, as its expression has been associated with the acquisition of tumorigenic phenotypes and cancer progression. We investigated the effects of targeting L1-MET in eight cancer cell lines derived from breast, lung, and gastrointestinal cancers, as well as in non-transformed human fibroblasts and lymphocytes, using specifically developed modified antisense oligonucleotides. Inhibition of L1-MET resulted in decreased cell viability, increased apoptosis, and gene expression profile reprogramming in cancer cells, including significant downregulation of MET and epidermal growth factor receptor (EGFR) proteins. These effects were related to the L1-MET/MET expression levels and the type of cellular addiction, with pronounced impacts in cells harboring MET gene amplification and EGFR-activating mutations. They were also detectable, though less pronounced, in cancer cells with steady-state levels of MET and EGFR proteins or addiction to other oncogenes. We demonstrate that targeting L1-MET can knockdown MET and EGFR protein. The restricted expression of L1-MET to cancer cells suggests that its inhibition could be an effective strategy to induce death in oncogene-addicted tumor cells and offers a potential means to overcome the limitations of conventional targeted therapies.http://www.sciencedirect.com/science/article/pii/S2162253125000836MT: Oligonucleotides: Therapies and ApplicationsL1-METchimeric transcriptcancer cell deathMET protein knockdownintragenic-LINE1-derived transcript targeting
spellingShingle Umberto Miglio
Enrico Berrino
Daniele Avanzato
Ivan Molineris
Valentina Miano
Melissa Milan
Letizia Lanzetti
Eugenio Morelli
James M. Hughes
Michele De Bortoli
Anna Sapino
Tiziana Venesio
Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells
Molecular Therapy: Nucleic Acids
MT: Oligonucleotides: Therapies and Applications
L1-MET
chimeric transcript
cancer cell death
MET protein knockdown
intragenic-LINE1-derived transcript targeting
title Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells
title_full Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells
title_fullStr Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells
title_full_unstemmed Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells
title_short Inhibition of the LINE1-derived MET transcript induces apoptosis and oncoprotein knockdown in cancer cells
title_sort inhibition of the line1 derived met transcript induces apoptosis and oncoprotein knockdown in cancer cells
topic MT: Oligonucleotides: Therapies and Applications
L1-MET
chimeric transcript
cancer cell death
MET protein knockdown
intragenic-LINE1-derived transcript targeting
url http://www.sciencedirect.com/science/article/pii/S2162253125000836
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