Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris

ABSTRACT Low‐cost and safe vaccines are needed to fill the vaccine inequity gap for future pandemics. Pichia pastoris is an ideal expression system for recombinant protein production due to its cost‐effective and easy‐to‐scale‐up process. Here, we developed a next‐generation SARS‐CoV2 Omicron BA.1‐b...

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Main Authors: Sibel Kalyoncu, Dogu Sayili, Ayca Zeybek Kuyucu, Hakan Soyturk, Seyda Gullu, Busra Ersayan, Ibrahim Oguzhan Tarman, Mehmet Ender Avci, Olcay Mert, Umut Haskok, Ege Tekin, Huseyin Akinturk, Ridvan Orkut, Aysegul Demirtas, Idil Tilmensagir, Ceren Ulker, Bilgi Gungor, Mehmet Inan
Format: Article
Language:English
Published: Wiley 2025-01-01
Series:Microbial Biotechnology
Subjects:
Online Access:https://doi.org/10.1111/1751-7915.70077
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author Sibel Kalyoncu
Dogu Sayili
Ayca Zeybek Kuyucu
Hakan Soyturk
Seyda Gullu
Busra Ersayan
Ibrahim Oguzhan Tarman
Mehmet Ender Avci
Olcay Mert
Umut Haskok
Ege Tekin
Huseyin Akinturk
Ridvan Orkut
Aysegul Demirtas
Idil Tilmensagir
Ceren Ulker
Bilgi Gungor
Mehmet Inan
author_facet Sibel Kalyoncu
Dogu Sayili
Ayca Zeybek Kuyucu
Hakan Soyturk
Seyda Gullu
Busra Ersayan
Ibrahim Oguzhan Tarman
Mehmet Ender Avci
Olcay Mert
Umut Haskok
Ege Tekin
Huseyin Akinturk
Ridvan Orkut
Aysegul Demirtas
Idil Tilmensagir
Ceren Ulker
Bilgi Gungor
Mehmet Inan
author_sort Sibel Kalyoncu
collection DOAJ
description ABSTRACT Low‐cost and safe vaccines are needed to fill the vaccine inequity gap for future pandemics. Pichia pastoris is an ideal expression system for recombinant protein production due to its cost‐effective and easy‐to‐scale‐up process. Here, we developed a next‐generation SARS‐CoV2 Omicron BA.1‐based recombinant vaccine candidate expressed in P. pastoris. The receptor binding domain of Omicron BA.1 spike protein (RBD‐Omicron) was produced at 0.35 g/L in supernatant. With a 60% recovery after two‐step purification, RBD‐Omicron showed 99% purity. After in vitro characterisation of purified RBD‐Omicron via chromatography, mass spectrometry, calorimetry and surface plasmon resonance‐based methods, it was injected into mice for immunization studies. Three different doses of Alum and CpG adjuvanted RBD‐Omicron were investigated and 10 μg RBD‐Omicron gave the highest antigenicity. After two doses of vaccination, IgG titers in mice serum reached to more than 106. These serum antibodies also recognized earlier (Delta Plus: B.1.617.2) and later (Eris: EG.5, Pirola: BA.2.86) SARS‐CoV2 variants. The long‐term immunological response in mice was measured by analyzing serum antibody titers and T‐cell response of splenocytes after 60 weeks. Interestingly, IgG titers and Th1 response were significantly high even after a year. Omicron subvariants are dominantly circulating in the world, so Omicron sub‐lineage‐based vaccines can be used for future pandemics. The RBD‐Omicron‐based vaccine candidate developed in this study is suitable for technology transfer and transition into the clinic.
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spelling doaj-art-2fda2c17432140cd9205bfb1dbd355ba2025-01-31T06:26:35ZengWileyMicrobial Biotechnology1751-79152025-01-01181n/an/a10.1111/1751-7915.70077Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastorisSibel Kalyoncu0Dogu Sayili1Ayca Zeybek Kuyucu2Hakan Soyturk3Seyda Gullu4Busra Ersayan5Ibrahim Oguzhan Tarman6Mehmet Ender Avci7Olcay Mert8Umut Haskok9Ege Tekin10Huseyin Akinturk11Ridvan Orkut12Aysegul Demirtas13Idil Tilmensagir14Ceren Ulker15Bilgi Gungor16Mehmet Inan17Izmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyIzmir Biomedicine and Genome Center Izmir TurkeyABSTRACT Low‐cost and safe vaccines are needed to fill the vaccine inequity gap for future pandemics. Pichia pastoris is an ideal expression system for recombinant protein production due to its cost‐effective and easy‐to‐scale‐up process. Here, we developed a next‐generation SARS‐CoV2 Omicron BA.1‐based recombinant vaccine candidate expressed in P. pastoris. The receptor binding domain of Omicron BA.1 spike protein (RBD‐Omicron) was produced at 0.35 g/L in supernatant. With a 60% recovery after two‐step purification, RBD‐Omicron showed 99% purity. After in vitro characterisation of purified RBD‐Omicron via chromatography, mass spectrometry, calorimetry and surface plasmon resonance‐based methods, it was injected into mice for immunization studies. Three different doses of Alum and CpG adjuvanted RBD‐Omicron were investigated and 10 μg RBD‐Omicron gave the highest antigenicity. After two doses of vaccination, IgG titers in mice serum reached to more than 106. These serum antibodies also recognized earlier (Delta Plus: B.1.617.2) and later (Eris: EG.5, Pirola: BA.2.86) SARS‐CoV2 variants. The long‐term immunological response in mice was measured by analyzing serum antibody titers and T‐cell response of splenocytes after 60 weeks. Interestingly, IgG titers and Th1 response were significantly high even after a year. Omicron subvariants are dominantly circulating in the world, so Omicron sub‐lineage‐based vaccines can be used for future pandemics. The RBD‐Omicron‐based vaccine candidate developed in this study is suitable for technology transfer and transition into the clinic.https://doi.org/10.1111/1751-7915.70077COVID‐19 vaccineomicron BA.1Pichia pastorisrecombinant protein subunit vaccineSARS‐CoV‐2
spellingShingle Sibel Kalyoncu
Dogu Sayili
Ayca Zeybek Kuyucu
Hakan Soyturk
Seyda Gullu
Busra Ersayan
Ibrahim Oguzhan Tarman
Mehmet Ender Avci
Olcay Mert
Umut Haskok
Ege Tekin
Huseyin Akinturk
Ridvan Orkut
Aysegul Demirtas
Idil Tilmensagir
Ceren Ulker
Bilgi Gungor
Mehmet Inan
Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris
Microbial Biotechnology
COVID‐19 vaccine
omicron BA.1
Pichia pastoris
recombinant protein subunit vaccine
SARS‐CoV‐2
title Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris
title_full Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris
title_fullStr Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris
title_full_unstemmed Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris
title_short Development of a Recombinant Omicron BA.1 Subunit Vaccine Candidate in Pichia pastoris
title_sort development of a recombinant omicron ba 1 subunit vaccine candidate in pichia pastoris
topic COVID‐19 vaccine
omicron BA.1
Pichia pastoris
recombinant protein subunit vaccine
SARS‐CoV‐2
url https://doi.org/10.1111/1751-7915.70077
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