A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy

Abstract The lysosome-targeting chimera (LYTAC) strategy provided a very powerful tool for the degradation of membrane proteins. However, the synthesis of LYTACs, antibody-small molecule conjugates, is challenging. The ability of antibody-based LYTACs to penetrate solid tumor is limited as well, esp...

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Main Authors: Youmei Xiao, Zhuoying He, Wanqiong Li, Danhong Chen, Xiaoshuang Niu, Xin Yang, Wenxuan Zeng, Mengfan Wang, Yuzhen Qian, Ye Su, Feiyu Luo, Guanyu Chen, Juan Liu, Xinghua Sui, Xiuman Zhou, Yanfeng Gao
Format: Article
Language:English
Published: Nature Portfolio 2025-02-01
Series:Nature Communications
Online Access:https://doi.org/10.1038/s41467-025-56648-6
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author Youmei Xiao
Zhuoying He
Wanqiong Li
Danhong Chen
Xiaoshuang Niu
Xin Yang
Wenxuan Zeng
Mengfan Wang
Yuzhen Qian
Ye Su
Feiyu Luo
Guanyu Chen
Juan Liu
Xinghua Sui
Xiuman Zhou
Yanfeng Gao
author_facet Youmei Xiao
Zhuoying He
Wanqiong Li
Danhong Chen
Xiaoshuang Niu
Xin Yang
Wenxuan Zeng
Mengfan Wang
Yuzhen Qian
Ye Su
Feiyu Luo
Guanyu Chen
Juan Liu
Xinghua Sui
Xiuman Zhou
Yanfeng Gao
author_sort Youmei Xiao
collection DOAJ
description Abstract The lysosome-targeting chimera (LYTAC) strategy provided a very powerful tool for the degradation of membrane proteins. However, the synthesis of LYTACs, antibody-small molecule conjugates, is challenging. The ability of antibody-based LYTACs to penetrate solid tumor is limited as well, especially to cross the blood-brain barrier (BBB). Here, we propose a covalent chimeric peptide-based targeted degradation platform (Pep-TACs) by introducing a long flexible aryl sulfonyl fluoride group, which allows proximity-enabled cross-linking upon binding with the protein of interest. The Pep-TACs platform facilitates the degradation of target proteins through the mechanism of recycling transferrin receptor (TFRC)-mediated lysosomal targeted endocytosis. Biological experiments demonstrate that covalent Pep-TACs can significantly degrade the expression of PD-L1 on tumor cells, dendritic cells and macrophages, especially under acidic conditions, and markedly enhance the function of T cells and tumor phagocytosis by macrophages. Furthermore, both in anti-PD-1-responsive and -resistant tumor models, the Pep-TACs exert significant anti-tumor immune response. It is noteworthy that Pep-TACs can cross the BBB and prolong the survival of mice with in situ brain tumor. As a proof-of-concept, this study introduces a modular TFRC-based covalent peptide degradation platform for the degradation of membrane protein, and especially for the immunotherapy of brain tumors.
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spelling doaj-art-2d8efaf86f23473f8f91653016caf9042025-02-09T12:45:07ZengNature PortfolioNature Communications2041-17232025-02-0116111610.1038/s41467-025-56648-6A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapyYoumei Xiao0Zhuoying He1Wanqiong Li2Danhong Chen3Xiaoshuang Niu4Xin Yang5Wenxuan Zeng6Mengfan Wang7Yuzhen Qian8Ye Su9Feiyu Luo10Guanyu Chen11Juan Liu12Xinghua Sui13Xiuman Zhou14Yanfeng Gao15School of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversityThe Seventh Affiliated Hospital, Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Life Sciences, Zhengzhou UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversitySchool of Pharmaceutical Sciences (Shenzhen), Shenzhen Campus of Sun Yat-sen UniversityAbstract The lysosome-targeting chimera (LYTAC) strategy provided a very powerful tool for the degradation of membrane proteins. However, the synthesis of LYTACs, antibody-small molecule conjugates, is challenging. The ability of antibody-based LYTACs to penetrate solid tumor is limited as well, especially to cross the blood-brain barrier (BBB). Here, we propose a covalent chimeric peptide-based targeted degradation platform (Pep-TACs) by introducing a long flexible aryl sulfonyl fluoride group, which allows proximity-enabled cross-linking upon binding with the protein of interest. The Pep-TACs platform facilitates the degradation of target proteins through the mechanism of recycling transferrin receptor (TFRC)-mediated lysosomal targeted endocytosis. Biological experiments demonstrate that covalent Pep-TACs can significantly degrade the expression of PD-L1 on tumor cells, dendritic cells and macrophages, especially under acidic conditions, and markedly enhance the function of T cells and tumor phagocytosis by macrophages. Furthermore, both in anti-PD-1-responsive and -resistant tumor models, the Pep-TACs exert significant anti-tumor immune response. It is noteworthy that Pep-TACs can cross the BBB and prolong the survival of mice with in situ brain tumor. As a proof-of-concept, this study introduces a modular TFRC-based covalent peptide degradation platform for the degradation of membrane protein, and especially for the immunotherapy of brain tumors.https://doi.org/10.1038/s41467-025-56648-6
spellingShingle Youmei Xiao
Zhuoying He
Wanqiong Li
Danhong Chen
Xiaoshuang Niu
Xin Yang
Wenxuan Zeng
Mengfan Wang
Yuzhen Qian
Ye Su
Feiyu Luo
Guanyu Chen
Juan Liu
Xinghua Sui
Xiuman Zhou
Yanfeng Gao
A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy
Nature Communications
title A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy
title_full A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy
title_fullStr A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy
title_full_unstemmed A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy
title_short A covalent peptide-based lysosome-targeting protein degradation platform for cancer immunotherapy
title_sort covalent peptide based lysosome targeting protein degradation platform for cancer immunotherapy
url https://doi.org/10.1038/s41467-025-56648-6
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