The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae)
Halodule uninervis (Forssk.) Boiss. 1882 is a seagrass species. The complete chloroplast genome is 164,005 bp in length, with a GC content of 36.3%. This genome consists of a large single-copy region of 87,522 bp, a small single-copy region of 11,481 bp and a pair of inverse repeat regions of 32,501...
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| Language: | English |
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Taylor & Francis Group
2024-11-01
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| Series: | Mitochondrial DNA. Part B. Resources |
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| Online Access: | https://www.tandfonline.com/doi/10.1080/23802359.2024.2429635 |
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| author | Mingzhong Liu Rongrong Shan Jiaxin Wu Yunfeng Shi Muqiu Zhao |
| author_facet | Mingzhong Liu Rongrong Shan Jiaxin Wu Yunfeng Shi Muqiu Zhao |
| author_sort | Mingzhong Liu |
| collection | DOAJ |
| description | Halodule uninervis (Forssk.) Boiss. 1882 is a seagrass species. The complete chloroplast genome is 164,005 bp in length, with a GC content of 36.3%. This genome consists of a large single-copy region of 87,522 bp, a small single-copy region of 11,481 bp and a pair of inverse repeat regions of 32,501 bp each. A total of 131 genes were annotated in the genome, including 87 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that H. uninervis shares the closest taxonomic relationship with Cymodocea rotundata and Syringodium isoetifolium, and all three species belong to the family Cymodoceaceae. |
| format | Article |
| id | doaj-art-285cbf3f2c98458a88005c0619fc1076 |
| institution | DOAJ |
| issn | 2380-2359 |
| language | English |
| publishDate | 2024-11-01 |
| publisher | Taylor & Francis Group |
| record_format | Article |
| series | Mitochondrial DNA. Part B. Resources |
| spelling | doaj-art-285cbf3f2c98458a88005c0619fc10762025-08-20T02:40:20ZengTaylor & Francis GroupMitochondrial DNA. Part B. Resources2380-23592024-11-019111564156810.1080/23802359.2024.2429635The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae)Mingzhong Liu0Rongrong Shan1Jiaxin Wu2Yunfeng Shi3Muqiu Zhao4Key Laboratory for Coastal Marine Eco-Environment Process and Carbon Sink of Hainan province, Yazhou Bay Innovation Institute, College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, ChinaKey Laboratory for Coastal Marine Eco-Environment Process and Carbon Sink of Hainan province, Yazhou Bay Innovation Institute, College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, ChinaKey Laboratory for Coastal Marine Eco-Environment Process and Carbon Sink of Hainan province, Yazhou Bay Innovation Institute, College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, ChinaKey Laboratory for Coastal Marine Eco-Environment Process and Carbon Sink of Hainan province, Yazhou Bay Innovation Institute, College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, ChinaKey Laboratory for Coastal Marine Eco-Environment Process and Carbon Sink of Hainan province, Yazhou Bay Innovation Institute, College of Ecology and Environment, Hainan Tropical Ocean University, Sanya, ChinaHalodule uninervis (Forssk.) Boiss. 1882 is a seagrass species. The complete chloroplast genome is 164,005 bp in length, with a GC content of 36.3%. This genome consists of a large single-copy region of 87,522 bp, a small single-copy region of 11,481 bp and a pair of inverse repeat regions of 32,501 bp each. A total of 131 genes were annotated in the genome, including 87 protein-coding genes, 36 tRNA genes, and 8 rRNA genes. Phylogenetic analysis revealed that H. uninervis shares the closest taxonomic relationship with Cymodocea rotundata and Syringodium isoetifolium, and all three species belong to the family Cymodoceaceae.https://www.tandfonline.com/doi/10.1080/23802359.2024.2429635Halodule uninervisCymodoceaceaechloroplast genomenext-generation sequencingphylogenetic analysis |
| spellingShingle | Mingzhong Liu Rongrong Shan Jiaxin Wu Yunfeng Shi Muqiu Zhao The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae) Mitochondrial DNA. Part B. Resources Halodule uninervis Cymodoceaceae chloroplast genome next-generation sequencing phylogenetic analysis |
| title | The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae) |
| title_full | The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae) |
| title_fullStr | The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae) |
| title_full_unstemmed | The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae) |
| title_short | The first complete chloroplast genome of Halodule uninervis (Forssk.) Boiss. 1882 (Cymodoceaceae) |
| title_sort | first complete chloroplast genome of halodule uninervis forssk boiss 1882 cymodoceaceae |
| topic | Halodule uninervis Cymodoceaceae chloroplast genome next-generation sequencing phylogenetic analysis |
| url | https://www.tandfonline.com/doi/10.1080/23802359.2024.2429635 |
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