Shotgun metagenomic sequencing reveals the influence of artisanal dairy environments on the microbiomes, quality, and safety of Idiazabal, a raw ewe milk PDO cheese

Shotgun metagenomic sequencing reveals the influence of artisanal dairy environments on the microbiomes, quality, and safety of Idiazabal, a raw ewe milk PDO cheese

Abstract Background Numerous studies have highlighted the impact of bacterial communities on the quality and safety of raw ewe milk-derived cheeses. Despite reported differences in the microbiota among cheese types and even producers, to the best of our knowledge, no study has comprehensively assess...

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Bibliographic Details
Main Authors: Gorka Santamarina-García, Min Yap, Fiona Crispie, Gustavo Amores, Cathy Lordan, Mailo Virto, Paul D. Cotter
Format: Article
Language:English
Published: BMC 2024-12-01
Series:Microbiome
Subjects:
Metagenomics
Shotgun sequencing
Virulence factors
Antimicrobial resistance genes
Hydrolase-encoding genes
Metagenome-assembled genomes
Online Access:https://doi.org/10.1186/s40168-024-01980-0
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