The genomic footprints of migration: how ancient DNA reveals our history of mobility

Abstract Ancient DNA has emerged as a powerful tool for studying human migration through the detection of admixture signatures. Here, we present the theoretical principles and methodologies for admixture analysis, with an emphasis on f-statistics and qpAdm. We review case studies from the literature...

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Main Authors: Matthew P. Williams, Christian D. Huber
Format: Article
Language:English
Published: BMC 2025-07-01
Series:Genome Biology
Online Access:https://doi.org/10.1186/s13059-025-03664-w
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author Matthew P. Williams
Christian D. Huber
author_facet Matthew P. Williams
Christian D. Huber
author_sort Matthew P. Williams
collection DOAJ
description Abstract Ancient DNA has emerged as a powerful tool for studying human migration through the detection of admixture signatures. Here, we present the theoretical principles and methodologies for admixture analysis, with an emphasis on f-statistics and qpAdm. We review case studies from the literature demonstrating how these methods uncover patterns of human mobility, and discuss challenges related to data quality, demographic complexity, and sample representativeness on admixture and migration inferences. Finally, we highlight promising advancements in admixture analysis and underscore the importance of integrating genetic, archaeological, and historical data to achieve a more interdisciplinary and nuanced reconstruction of human history.
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institution Kabale University
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spelling doaj-art-22a5733ed84d43bf8f28f3c1171e8d402025-08-20T03:43:22ZengBMCGenome Biology1474-760X2025-07-0126112910.1186/s13059-025-03664-wThe genomic footprints of migration: how ancient DNA reveals our history of mobilityMatthew P. Williams0Christian D. Huber1Department of Biology, The Pennsylvania State UniversityDepartment of Biology, The Pennsylvania State UniversityAbstract Ancient DNA has emerged as a powerful tool for studying human migration through the detection of admixture signatures. Here, we present the theoretical principles and methodologies for admixture analysis, with an emphasis on f-statistics and qpAdm. We review case studies from the literature demonstrating how these methods uncover patterns of human mobility, and discuss challenges related to data quality, demographic complexity, and sample representativeness on admixture and migration inferences. Finally, we highlight promising advancements in admixture analysis and underscore the importance of integrating genetic, archaeological, and historical data to achieve a more interdisciplinary and nuanced reconstruction of human history.https://doi.org/10.1186/s13059-025-03664-w
spellingShingle Matthew P. Williams
Christian D. Huber
The genomic footprints of migration: how ancient DNA reveals our history of mobility
Genome Biology
title The genomic footprints of migration: how ancient DNA reveals our history of mobility
title_full The genomic footprints of migration: how ancient DNA reveals our history of mobility
title_fullStr The genomic footprints of migration: how ancient DNA reveals our history of mobility
title_full_unstemmed The genomic footprints of migration: how ancient DNA reveals our history of mobility
title_short The genomic footprints of migration: how ancient DNA reveals our history of mobility
title_sort genomic footprints of migration how ancient dna reveals our history of mobility
url https://doi.org/10.1186/s13059-025-03664-w
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