A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS
Abstract Grapevine is an important commercial crop widely grown in the world. However, grapevine cultivation has long been seriously threatened by grapevine downy mildew caused by Plasmopara viticola. Screening the resistance resources and identifying the resistance germplasm is the key to improve t...
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Nature Portfolio
2025-04-01
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| Series: | Scientific Data |
| Online Access: | https://doi.org/10.1038/s41597-025-04765-8 |
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| author | Bohan Yang Chen Li Rui Li Yachun Peng Xiangyi Li Zhigang Dong Qifeng Zhao James Lin Qifei Gao Jiang Lu Peining Fu |
| author_facet | Bohan Yang Chen Li Rui Li Yachun Peng Xiangyi Li Zhigang Dong Qifeng Zhao James Lin Qifei Gao Jiang Lu Peining Fu |
| author_sort | Bohan Yang |
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| description | Abstract Grapevine is an important commercial crop widely grown in the world. However, grapevine cultivation has long been seriously threatened by grapevine downy mildew caused by Plasmopara viticola. Screening the resistance resources and identifying the resistance germplasm is the key to improve the resistance of cultivars to P. viticola. East Asia is one of the three origin regions of wild grapevine (North America, Eurasia and East Asia), and many varieties have strong disease resistance. In present study, we selected nine wild East Asian grape vines and selected three of them with the highest P. viticola resistance to construct genetic populations. Genotyping by Targeted Sequencing (GBTS) is a high-throughput and cost-effective technology for sequencing specific genome regions, and its application in genetic population analysis and disease resistance related markers identification has revealed that may be abundant P. viticola-resistant germplasm in East Asian grapes. Our sequencing data and disease resistance grade data provided a valuable reference for mining downy mildew resistant germplasm of East Asian grape and breeding resistant varieties. |
| format | Article |
| id | doaj-art-211b81ab3bb343bb9cb651d5c98e5877 |
| institution | OA Journals |
| issn | 2052-4463 |
| language | English |
| publishDate | 2025-04-01 |
| publisher | Nature Portfolio |
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| series | Scientific Data |
| spelling | doaj-art-211b81ab3bb343bb9cb651d5c98e58772025-08-20T02:17:57ZengNature PortfolioScientific Data2052-44632025-04-011211610.1038/s41597-025-04765-8A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTSBohan Yang0Chen Li1Rui Li2Yachun Peng3Xiangyi Li4Zhigang Dong5Qifeng Zhao6James Lin7Qifei Gao8Jiang Lu9Peining Fu10Center for Viticulture and Enology, School of Agriculture and Biology, Shanghai Jiao Tong UniversityNetwork and Information Center, Shanghai Jiao Tong UniversityNetwork and Information Center, Shanghai Jiao Tong UniversityCenter for Viticulture and Enology, School of Agriculture and Biology, Shanghai Jiao Tong UniversityCenter for Viticulture and Enology, School of Agriculture and Biology, Shanghai Jiao Tong UniversityPomology Institute of Shanxi Agricultural UniversityPomology Institute of Shanxi Agricultural UniversityNetwork and Information Center, Shanghai Jiao Tong UniversityCenter for Viticulture and Enology, School of Agriculture and Biology, Shanghai Jiao Tong UniversityCenter for Viticulture and Enology, School of Agriculture and Biology, Shanghai Jiao Tong UniversityCenter for Viticulture and Enology, School of Agriculture and Biology, Shanghai Jiao Tong UniversityAbstract Grapevine is an important commercial crop widely grown in the world. However, grapevine cultivation has long been seriously threatened by grapevine downy mildew caused by Plasmopara viticola. Screening the resistance resources and identifying the resistance germplasm is the key to improve the resistance of cultivars to P. viticola. East Asia is one of the three origin regions of wild grapevine (North America, Eurasia and East Asia), and many varieties have strong disease resistance. In present study, we selected nine wild East Asian grape vines and selected three of them with the highest P. viticola resistance to construct genetic populations. Genotyping by Targeted Sequencing (GBTS) is a high-throughput and cost-effective technology for sequencing specific genome regions, and its application in genetic population analysis and disease resistance related markers identification has revealed that may be abundant P. viticola-resistant germplasm in East Asian grapes. Our sequencing data and disease resistance grade data provided a valuable reference for mining downy mildew resistant germplasm of East Asian grape and breeding resistant varieties.https://doi.org/10.1038/s41597-025-04765-8 |
| spellingShingle | Bohan Yang Chen Li Rui Li Yachun Peng Xiangyi Li Zhigang Dong Qifeng Zhao James Lin Qifei Gao Jiang Lu Peining Fu A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS Scientific Data |
| title | A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS |
| title_full | A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS |
| title_fullStr | A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS |
| title_full_unstemmed | A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS |
| title_short | A Dataset of SNPs Related to Downy Mildew Resistance in East Asian Grape Based on GBTS |
| title_sort | dataset of snps related to downy mildew resistance in east asian grape based on gbts |
| url | https://doi.org/10.1038/s41597-025-04765-8 |
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