A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition
Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery,...
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| Format: | Article |
| Language: | English |
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BioMed Central
2019-06-01
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| Series: | Genomics & Informatics |
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| Online Access: | http://genominfo.org/upload/pdf/gi-2019-17-2-e18.pdf |
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| _version_ | 1832569240424546304 |
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| author | Mina Gachloo Yuxing Wang Jingbo Xia |
| author_facet | Mina Gachloo Yuxing Wang Jingbo Xia |
| author_sort | Mina Gachloo |
| collection | DOAJ |
| description | Prediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area. |
| format | Article |
| id | doaj-art-1bf643d809ff481593c799a6201e5df0 |
| institution | Kabale University |
| issn | 2234-0742 |
| language | English |
| publishDate | 2019-06-01 |
| publisher | BioMed Central |
| record_format | Article |
| series | Genomics & Informatics |
| spelling | doaj-art-1bf643d809ff481593c799a6201e5df02025-02-02T22:28:50ZengBioMed CentralGenomics & Informatics2234-07422019-06-0117210.5808/GI.2019.17.2.e18563A review of drug knowledge discovery using BioNLP and tensor or matrix decompositionMina Gachloo0Yuxing Wang1Jingbo Xia2 Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, China Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, China Hubei Key Laboratory of Agricultural Bioinformatics, College of Informatics, Huazhong Agricultural University, Wuhan 430070, ChinaPrediction of the relations among drug and other molecular or social entities is the main knowledge discovery pattern for the purpose of drug-related knowledge discovery. Computational approaches have combined the information from different resources and levels for drug-related knowledge discovery, which provides a sophisticated comprehension of the relationship among drugs, targets, diseases, and targeted genes, at the molecular level, or relationships among drugs, usage, side effect, safety, and user preference, at a social level. In this research, previous work from the BioNLP community and matrix or tensor decomposition was reviewed, compared, and concluded, and eventually, the BioNLP open-shared task was introduced as a promising case study representing this area.http://genominfo.org/upload/pdf/gi-2019-17-2-e18.pdfBioNLPdrug knowledge discoverytensor decomposition |
| spellingShingle | Mina Gachloo Yuxing Wang Jingbo Xia A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition Genomics & Informatics BioNLP drug knowledge discovery tensor decomposition |
| title | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
| title_full | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
| title_fullStr | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
| title_full_unstemmed | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
| title_short | A review of drug knowledge discovery using BioNLP and tensor or matrix decomposition |
| title_sort | review of drug knowledge discovery using bionlp and tensor or matrix decomposition |
| topic | BioNLP drug knowledge discovery tensor decomposition |
| url | http://genominfo.org/upload/pdf/gi-2019-17-2-e18.pdf |
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