Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model
Hematoxylin and Eosin (HE) staining is the gold standard in histopathological examination of cancer tissue, representing the first step towards cancer diagnosis. The second step is a series of immunohistochemical stainings, including cell proliferation markers called the Ki67 index. Deep learning mo...
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MDPI AG
2025-04-01
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| author | Lucia Piatriková Katarína Tobiášová Andrej Štefák Dominika Petríková Lukáš Plank Ivan Cimrák |
| author_facet | Lucia Piatriková Katarína Tobiášová Andrej Štefák Dominika Petríková Lukáš Plank Ivan Cimrák |
| author_sort | Lucia Piatriková |
| collection | DOAJ |
| description | Hematoxylin and Eosin (HE) staining is the gold standard in histopathological examination of cancer tissue, representing the first step towards cancer diagnosis. The second step is a series of immunohistochemical stainings, including cell proliferation markers called the Ki67 index. Deep learning models offer promising solutions for improving medical diagnostics, while generative models provide additional explainability of predictive models that is essential for their adoption in clinical practice. Our previous work introduced a novel approach that utilises a conditional StyleGAN model for generating HE-stained images conditioned on the Ki67 index. This study proposes to employ this model for generating sequences of HE-stained images reflecting varying Ki67 index values. Sequences enable exploration of hidden relationships between HE and Ki67 staining and can enhance the explainability of predictive models, e.g., by generating counterfactual examples. While our previous research focused on assessing the quality of generated HE images, this study extends that work by evaluating the model’s ability to capture Ki67-related variations in HE-stained images. Additionally, expert pathologists evaluated generated sequences and proposed criteria for assessing their relevance. Our findings demonstrate the potential of the conditional StyleGAN model as part of an explainable framework for analysing and predicting immunohistochemical information from HE-stained images. Results highlight the relevance of generative models in histopathology and their potential applications in cancer progression analysis. |
| format | Article |
| id | doaj-art-1a8a83917b1b4b8bbbb574ac63d66297 |
| institution | OA Journals |
| issn | 2306-5354 |
| language | English |
| publishDate | 2025-04-01 |
| publisher | MDPI AG |
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| series | Bioengineering |
| spelling | doaj-art-1a8a83917b1b4b8bbbb574ac63d662972025-08-20T02:33:43ZengMDPI AGBioengineering2306-53542025-04-0112547610.3390/bioengineering12050476Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN ModelLucia Piatriková0Katarína Tobiášová1Andrej Štefák2Dominika Petríková3Lukáš Plank4Ivan Cimrák5Department of Software Technologies, Faculty of Management Science and Informatics, University of Žilina, 010 26 Žilina, SlovakiaDepartment of Pathological Anatomy, Jessenius Faculty of Medicine in Martin, Comenius University Bratislava and University Hospital, 036 01 Martin, SlovakiaDepartment of Pathological Anatomy, Jessenius Faculty of Medicine in Martin, Comenius University Bratislava and University Hospital, 036 01 Martin, SlovakiaDepartment of Software Technologies, Faculty of Management Science and Informatics, University of Žilina, 010 26 Žilina, SlovakiaDepartment of Pathological Anatomy, Jessenius Faculty of Medicine in Martin, Comenius University Bratislava and University Hospital, 036 01 Martin, SlovakiaDepartment of Software Technologies, Faculty of Management Science and Informatics, University of Žilina, 010 26 Žilina, SlovakiaHematoxylin and Eosin (HE) staining is the gold standard in histopathological examination of cancer tissue, representing the first step towards cancer diagnosis. The second step is a series of immunohistochemical stainings, including cell proliferation markers called the Ki67 index. Deep learning models offer promising solutions for improving medical diagnostics, while generative models provide additional explainability of predictive models that is essential for their adoption in clinical practice. Our previous work introduced a novel approach that utilises a conditional StyleGAN model for generating HE-stained images conditioned on the Ki67 index. This study proposes to employ this model for generating sequences of HE-stained images reflecting varying Ki67 index values. Sequences enable exploration of hidden relationships between HE and Ki67 staining and can enhance the explainability of predictive models, e.g., by generating counterfactual examples. While our previous research focused on assessing the quality of generated HE images, this study extends that work by evaluating the model’s ability to capture Ki67-related variations in HE-stained images. Additionally, expert pathologists evaluated generated sequences and proposed criteria for assessing their relevance. Our findings demonstrate the potential of the conditional StyleGAN model as part of an explainable framework for analysing and predicting immunohistochemical information from HE-stained images. Results highlight the relevance of generative models in histopathology and their potential applications in cancer progression analysis.https://www.mdpi.com/2306-5354/12/5/476hematoxylin and eosinKi67conditional GANStyleGANdigital pathology |
| spellingShingle | Lucia Piatriková Katarína Tobiášová Andrej Štefák Dominika Petríková Lukáš Plank Ivan Cimrák Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model Bioengineering hematoxylin and eosin Ki67 conditional GAN StyleGAN digital pathology |
| title | Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model |
| title_full | Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model |
| title_fullStr | Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model |
| title_full_unstemmed | Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model |
| title_short | Modelling the Ki67 Index in Synthetic HE-Stained Images Using Conditional StyleGAN Model |
| title_sort | modelling the ki67 index in synthetic he stained images using conditional stylegan model |
| topic | hematoxylin and eosin Ki67 conditional GAN StyleGAN digital pathology |
| url | https://www.mdpi.com/2306-5354/12/5/476 |
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