Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo

Abstract Pathogens have been documented to be transmissible between humans and non‐human primates (NHPs), with NHPs demonstrating susceptibility to human viruses. Conducting surveillance for viruses in NHPs to identify potential zoonotic agents that may emerge or pose a high risk of spillover remain...

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Main Authors: Ruiying Liang, Xinming Tang, Lin Liang, Jiabo Ding, Ye Tian, Yixian Qin, Sufen Zhao, Lixia Zhang, Tianchun Pu, Xuefeng Liu, Jinpeng Liu, Chenglin Zhang, Zibin Li, Ting Jia
Format: Article
Language:English
Published: Wiley 2025-05-01
Series:Animal Research and One Health
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Online Access:https://doi.org/10.1002/aro2.79
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author Ruiying Liang
Xinming Tang
Lin Liang
Jiabo Ding
Ye Tian
Yixian Qin
Sufen Zhao
Lixia Zhang
Tianchun Pu
Xuefeng Liu
Jinpeng Liu
Chenglin Zhang
Zibin Li
Ting Jia
author_facet Ruiying Liang
Xinming Tang
Lin Liang
Jiabo Ding
Ye Tian
Yixian Qin
Sufen Zhao
Lixia Zhang
Tianchun Pu
Xuefeng Liu
Jinpeng Liu
Chenglin Zhang
Zibin Li
Ting Jia
author_sort Ruiying Liang
collection DOAJ
description Abstract Pathogens have been documented to be transmissible between humans and non‐human primates (NHPs), with NHPs demonstrating susceptibility to human viruses. Conducting surveillance for viruses in NHPs to identify potential zoonotic agents that may emerge or pose a high risk of spillover remains a critical strategy for preparing for and responding to future zoonotic events. This study employed viral metagenomic analysis on nine randomly selected NHPs from the Zoo in China to detect potential pathogens within captive environments. The analysis identified the presence of picornavirus Encephalomyocarditis virus (EMCV), poxvirus (BeAn 58,058 virus, BAV), and retroviruses (human endogenous retrovirus, HERV and baboon endogenous virus, BaEV). These viruses exhibited significant genetic homology to established viral strains, with EMCV demonstrating close relatedness to a strain previously detected in the United States, and BAV beling newly identified in NHPs. The study suggests that zoo rodents, particularly rats, serve as the primary reservoirs for the viruses, thereby posing a potential threat to public health. Therefore, this underscores the imperative to enhance rodent control measures within zoological institutions and provides strategic recommendations for mitigating interspecies viral transmission.
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spelling doaj-art-1846bd0133d24fa49ffc8b8382a03fe02025-08-20T02:33:08ZengWileyAnimal Research and One Health2835-50752025-05-013221722810.1002/aro2.79Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zooRuiying Liang0Xinming Tang1Lin Liang2Jiabo Ding3Ye Tian4Yixian Qin5Sufen Zhao6Lixia Zhang7Tianchun Pu8Xuefeng Liu9Jinpeng Liu10Chenglin Zhang11Zibin Li12Ting Jia13Key Laboratory of Animal Biosafety Risk Prevention and Control (North) & Key Laboratory of Veterinary Biological Products and Chemical Drugs of MARA Institute of Animal Sciences, Chinese Academy of Agricultural Science Beijing ChinaKey Laboratory of Animal Biosafety Risk Prevention and Control (North) & Key Laboratory of Veterinary Biological Products and Chemical Drugs of MARA Institute of Animal Sciences, Chinese Academy of Agricultural Science Beijing ChinaKey Laboratory of Animal Biosafety Risk Prevention and Control (North) & Key Laboratory of Veterinary Biological Products and Chemical Drugs of MARA Institute of Animal Sciences, Chinese Academy of Agricultural Science Beijing ChinaKey Laboratory of Animal Biosafety Risk Prevention and Control (North) & Key Laboratory of Veterinary Biological Products and Chemical Drugs of MARA Institute of Animal Sciences, Chinese Academy of Agricultural Science Beijing ChinaChina Institute of Veterinary Drug Control Beijing ChinaChina Institute of Veterinary Drug Control Beijing ChinaBeijing Key Laboratory of Captive Wildlife Technologies Beijing Zoo Beijing ChinaTaiyuan Zoo Taiyuan City Shanxi Province ChinaBeijing Key Laboratory of Captive Wildlife Technologies Beijing Zoo Beijing ChinaBeijing Key Laboratory of Captive Wildlife Technologies Beijing Zoo Beijing ChinaBeijing Key Laboratory of Captive Wildlife Technologies Beijing Zoo Beijing ChinaBeijing Key Laboratory of Captive Wildlife Technologies Beijing Zoo Beijing ChinaDepartment of Bioengineering College of Life and Health Dalian University Dalian Liaoning ChinaBeijing Key Laboratory of Captive Wildlife Technologies Beijing Zoo Beijing ChinaAbstract Pathogens have been documented to be transmissible between humans and non‐human primates (NHPs), with NHPs demonstrating susceptibility to human viruses. Conducting surveillance for viruses in NHPs to identify potential zoonotic agents that may emerge or pose a high risk of spillover remains a critical strategy for preparing for and responding to future zoonotic events. This study employed viral metagenomic analysis on nine randomly selected NHPs from the Zoo in China to detect potential pathogens within captive environments. The analysis identified the presence of picornavirus Encephalomyocarditis virus (EMCV), poxvirus (BeAn 58,058 virus, BAV), and retroviruses (human endogenous retrovirus, HERV and baboon endogenous virus, BaEV). These viruses exhibited significant genetic homology to established viral strains, with EMCV demonstrating close relatedness to a strain previously detected in the United States, and BAV beling newly identified in NHPs. The study suggests that zoo rodents, particularly rats, serve as the primary reservoirs for the viruses, thereby posing a potential threat to public health. Therefore, this underscores the imperative to enhance rodent control measures within zoological institutions and provides strategic recommendations for mitigating interspecies viral transmission.https://doi.org/10.1002/aro2.79non‐human primatespicornaviruspoxvirusretrovirusviral metagenomics
spellingShingle Ruiying Liang
Xinming Tang
Lin Liang
Jiabo Ding
Ye Tian
Yixian Qin
Sufen Zhao
Lixia Zhang
Tianchun Pu
Xuefeng Liu
Jinpeng Liu
Chenglin Zhang
Zibin Li
Ting Jia
Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo
Animal Research and One Health
non‐human primates
picornavirus
poxvirus
retrovirus
viral metagenomics
title Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo
title_full Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo
title_fullStr Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo
title_full_unstemmed Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo
title_short Viral metagenomic analysis reveals potential biological hazards in non‐human primates in a zoo
title_sort viral metagenomic analysis reveals potential biological hazards in non human primates in a zoo
topic non‐human primates
picornavirus
poxvirus
retrovirus
viral metagenomics
url https://doi.org/10.1002/aro2.79
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