Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes

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Main Authors: Haoyu Wu, Annie S. P. Yang, Suzan Stelloo, Floris J. M. Roos, René H. M. te Morsche, Anne H. Verkerk, Maria V. Luna-Velez, Laura Wingens, Johannes H. W. de Wilt, Robert W. Sauerwein, Klaas W. Mulder, Simon J. van Heeringen, Monique M. A. Verstegen, Luc J. W. van der Laan, Hendrik Marks, Richárd Bártfai
Format: Article
Language:English
Published: The Company of Biologists 2025-01-01
Series:Disease Models & Mechanisms
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Online Access:http://dmm.biologists.org/content/18/1/dmm050883
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author Haoyu Wu
Annie S. P. Yang
Suzan Stelloo
Floris J. M. Roos
René H. M. te Morsche
Anne H. Verkerk
Maria V. Luna-Velez
Laura Wingens
Johannes H. W. de Wilt
Robert W. Sauerwein
Klaas W. Mulder
Simon J. van Heeringen
Monique M. A. Verstegen
Luc J. W. van der Laan
Hendrik Marks
Richárd Bártfai
author_facet Haoyu Wu
Annie S. P. Yang
Suzan Stelloo
Floris J. M. Roos
René H. M. te Morsche
Anne H. Verkerk
Maria V. Luna-Velez
Laura Wingens
Johannes H. W. de Wilt
Robert W. Sauerwein
Klaas W. Mulder
Simon J. van Heeringen
Monique M. A. Verstegen
Luc J. W. van der Laan
Hendrik Marks
Richárd Bártfai
author_sort Haoyu Wu
collection DOAJ
format Article
id doaj-art-17f615581e4848878bce56eb6907c502
institution Kabale University
issn 1754-8403
1754-8411
language English
publishDate 2025-01-01
publisher The Company of Biologists
record_format Article
series Disease Models & Mechanisms
spelling doaj-art-17f615581e4848878bce56eb6907c5022025-02-12T06:59:02ZengThe Company of BiologistsDisease Models & Mechanisms1754-84031754-84112025-01-0118110.1242/dmm.050883050883Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytesHaoyu Wu0Annie S. P. Yang1Suzan Stelloo2Floris J. M. Roos3René H. M. te Morsche4Anne H. Verkerk5Maria V. Luna-Velez6Laura Wingens7Johannes H. W. de Wilt8Robert W. Sauerwein9Klaas W. Mulder10Simon J. van Heeringen11Monique M. A. Verstegen12Luc J. W. van der Laan13Hendrik Marks14Richárd Bártfai15 Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Science, Radboud University, Nijmegen 6525GA, The Netherlands Center for Infectious Diseases, Department of Medical Microbiology, Radboud University Medical Center, Nijmegen 6500HB, The Netherlands Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Science, Radboud University, Nijmegen 6525GA, The Netherlands Department of Surgery, Erasmus University Medical Center Transplant Institute, University Medical Center Rotterdam, Rotterdam 3000CA, The Netherlands Department of Gastroenterology and Hepatology, Radboud Institute for Molecular Life Sciences, Radboud University Medical Center, Nijmegen 6500HB, The Netherlands Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Science, Radboud University, Nijmegen 6525GA, The Netherlands Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Science, Radboud University, Nijmegen 6525GA, The Netherlands Department of Molecular Developmental Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen 6525GA, The Netherlands Department of Surgery, Radboud University Medical Center, Nijmegen 6500HB, The Netherlands Center for Infectious Diseases, Department of Medical Microbiology, Radboud University Medical Center, Nijmegen 6500HB, The Netherlands Department of Molecular Developmental Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen 6525GA, The Netherlands Department of Molecular Developmental Biology, Faculty of Science, Radboud Institute for Molecular Life Sciences, Radboud University, Nijmegen 6525GA, The Netherlands Department of Surgery, Erasmus University Medical Center Transplant Institute, University Medical Center Rotterdam, Rotterdam 3000CA, The Netherlands Department of Surgery, Erasmus University Medical Center Transplant Institute, University Medical Center Rotterdam, Rotterdam 3000CA, The Netherlands Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Science, Radboud University, Nijmegen 6525GA, The Netherlands Department of Molecular Biology, Faculty of Science, Radboud Institute for Molecular Life Science, Radboud University, Nijmegen 6525GA, The Netherlands http://dmm.biologists.org/content/18/1/dmm050883intrahepatic cholangiocyte organoidsprimary human hepatocytesscrna-seqgene regulatory networkelf3
spellingShingle Haoyu Wu
Annie S. P. Yang
Suzan Stelloo
Floris J. M. Roos
René H. M. te Morsche
Anne H. Verkerk
Maria V. Luna-Velez
Laura Wingens
Johannes H. W. de Wilt
Robert W. Sauerwein
Klaas W. Mulder
Simon J. van Heeringen
Monique M. A. Verstegen
Luc J. W. van der Laan
Hendrik Marks
Richárd Bártfai
Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes
Disease Models & Mechanisms
intrahepatic cholangiocyte organoids
primary human hepatocytes
scrna-seq
gene regulatory network
elf3
title Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes
title_full Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes
title_fullStr Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes
title_full_unstemmed Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes
title_short Multi-omics analysis reveals distinct gene regulatory mechanisms between primary and organoid-derived human hepatocytes
title_sort multi omics analysis reveals distinct gene regulatory mechanisms between primary and organoid derived human hepatocytes
topic intrahepatic cholangiocyte organoids
primary human hepatocytes
scrna-seq
gene regulatory network
elf3
url http://dmm.biologists.org/content/18/1/dmm050883
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