Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells

Approximately 80%–90% of uveal melanomas (UVM) harbor a single base pair substitution in one of two Gα protein subunits (GNAQQ209L/P/GNA11Q209L), resulting in constitutive activation and tumor initiation/progression. Herein, a small interfering RNA (siRNA) that specifically targets GNAQQ209L transcr...

Full description

Saved in:
Bibliographic Details
Main Authors: Trace F. McCall, Emma J. Sawyer, Joshua Darnell, Matthew L. Hirsch, Jacquelyn J. Bower
Format: Article
Language:English
Published: Elsevier 2025-09-01
Series:Molecular Therapy: Oncology
Subjects:
Online Access:http://www.sciencedirect.com/science/article/pii/S295032992500089X
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1849248155571322880
author Trace F. McCall
Emma J. Sawyer
Joshua Darnell
Matthew L. Hirsch
Jacquelyn J. Bower
author_facet Trace F. McCall
Emma J. Sawyer
Joshua Darnell
Matthew L. Hirsch
Jacquelyn J. Bower
author_sort Trace F. McCall
collection DOAJ
description Approximately 80%–90% of uveal melanomas (UVM) harbor a single base pair substitution in one of two Gα protein subunits (GNAQQ209L/P/GNA11Q209L), resulting in constitutive activation and tumor initiation/progression. Herein, a small interfering RNA (siRNA) that specifically targets GNAQQ209L transcripts induced significant cell death in GNAQQ209L UVM cells, whereas little to no effects were observed on GNAQwt cells or GNAQwt transcripts. The most effective siRNA sequence was subsequently encoded into a short hairpin RNA (shRNA) cassette (shGNAQQ209L), expressed in a recombinant adeno-associated virus (rAAV), and the AAV2 capsid was selected for viral production upon completion of a serotype survey in UVM cells. Transduction with rAAV2-shGNAQQ209L induced significant cell death in GNAQQ209L cells but not in a GNAQwt UVM line. Unexpectedly, cell death in the GNAQQ209L UVM cells was also observed upon transduction with the non-targeting control rAAV2 (although to a lesser degree than rAAV2-shGNAQQ209L), suggesting that an element of the AAV vector itself exhibits toxicity in GNAQQ209L UVM cells. This work is among the first describing a genetic-based rAAV approach to specifically target an oncogenic mutant driver allele using single base pair allelic discrimination, collectively demonstrating that both siRNA and rAAV methods of GNAQQ209L depletion result in significant UVM cell death.
format Article
id doaj-art-172098a1fe9740eca92cf6c6387c1663
institution Kabale University
issn 2950-3299
language English
publishDate 2025-09-01
publisher Elsevier
record_format Article
series Molecular Therapy: Oncology
spelling doaj-art-172098a1fe9740eca92cf6c6387c16632025-08-20T03:58:00ZengElsevierMolecular Therapy: Oncology2950-32992025-09-0133320102010.1016/j.omton.2025.201020Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cellsTrace F. McCall0Emma J. Sawyer1Joshua Darnell2Matthew L. Hirsch3Jacquelyn J. Bower4Department of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Carolina Eye Research Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USADepartment of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Carolina Eye Research Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USADepartment of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Carolina Eye Research Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USADepartment of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Carolina Eye Research Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Gene Therapy Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USADepartment of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Carolina Eye Research Institute, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Lineberger Comprehensive Cancer Center, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA; Corresponding author: Jacquelyn J. Bower, Department of Ophthalmology, University of North Carolina at Chapel Hill, Chapel Hill, NC, USA.Approximately 80%–90% of uveal melanomas (UVM) harbor a single base pair substitution in one of two Gα protein subunits (GNAQQ209L/P/GNA11Q209L), resulting in constitutive activation and tumor initiation/progression. Herein, a small interfering RNA (siRNA) that specifically targets GNAQQ209L transcripts induced significant cell death in GNAQQ209L UVM cells, whereas little to no effects were observed on GNAQwt cells or GNAQwt transcripts. The most effective siRNA sequence was subsequently encoded into a short hairpin RNA (shRNA) cassette (shGNAQQ209L), expressed in a recombinant adeno-associated virus (rAAV), and the AAV2 capsid was selected for viral production upon completion of a serotype survey in UVM cells. Transduction with rAAV2-shGNAQQ209L induced significant cell death in GNAQQ209L cells but not in a GNAQwt UVM line. Unexpectedly, cell death in the GNAQQ209L UVM cells was also observed upon transduction with the non-targeting control rAAV2 (although to a lesser degree than rAAV2-shGNAQQ209L), suggesting that an element of the AAV vector itself exhibits toxicity in GNAQQ209L UVM cells. This work is among the first describing a genetic-based rAAV approach to specifically target an oncogenic mutant driver allele using single base pair allelic discrimination, collectively demonstrating that both siRNA and rAAV methods of GNAQQ209L depletion result in significant UVM cell death.http://www.sciencedirect.com/science/article/pii/S295032992500089XMT: Regular Issueuveal melanomaadeno-associated virusAAVcancer gene therapyGNAQ
spellingShingle Trace F. McCall
Emma J. Sawyer
Joshua Darnell
Matthew L. Hirsch
Jacquelyn J. Bower
Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells
Molecular Therapy: Oncology
MT: Regular Issue
uveal melanoma
adeno-associated virus
AAV
cancer gene therapy
GNAQ
title Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells
title_full Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells
title_fullStr Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells
title_full_unstemmed Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells
title_short Allele-specific depletion of GNAQQ209L via siRNA or an rAAV2-shRNA vector induces selective toxicity in GNAQQ209L uveal melanoma cells
title_sort allele specific depletion of gnaqq209l via sirna or an raav2 shrna vector induces selective toxicity in gnaqq209l uveal melanoma cells
topic MT: Regular Issue
uveal melanoma
adeno-associated virus
AAV
cancer gene therapy
GNAQ
url http://www.sciencedirect.com/science/article/pii/S295032992500089X
work_keys_str_mv AT tracefmccall allelespecificdepletionofgnaqq209lviasirnaoranraav2shrnavectorinducesselectivetoxicityingnaqq209luvealmelanomacells
AT emmajsawyer allelespecificdepletionofgnaqq209lviasirnaoranraav2shrnavectorinducesselectivetoxicityingnaqq209luvealmelanomacells
AT joshuadarnell allelespecificdepletionofgnaqq209lviasirnaoranraav2shrnavectorinducesselectivetoxicityingnaqq209luvealmelanomacells
AT matthewlhirsch allelespecificdepletionofgnaqq209lviasirnaoranraav2shrnavectorinducesselectivetoxicityingnaqq209luvealmelanomacells
AT jacquelynjbower allelespecificdepletionofgnaqq209lviasirnaoranraav2shrnavectorinducesselectivetoxicityingnaqq209luvealmelanomacells