Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective
The relationship between microbiome and cancer in the oral cavity has been under intense scrutiny over the past decade due to the advancement in next-generation sequencing. However, rapid accumulation of sequencing data may yield more questions than answers. Although such inconclusiveness can b...
Saved in:
| Main Authors: | , , , |
|---|---|
| Format: | Article |
| Language: | English |
| Published: |
International Dental Educationists’ Association (IDEA)
2024-12-01
|
| Series: | Journal of Multidisciplinary Dental Research |
| Online Access: | https://jmdr-idea.com/articles/microbiome-and-cancer-in-the-oral-cavity-a-bioinformatics-perspective |
| Tags: |
Add Tag
No Tags, Be the first to tag this record!
|
| _version_ | 1850054193833836544 |
|---|---|
| author | Yu-Cheng Lin Ding-Han Wang Cheng-Chieh Yang Ming-Lun Hsu |
| author_facet | Yu-Cheng Lin Ding-Han Wang Cheng-Chieh Yang Ming-Lun Hsu |
| author_sort | Yu-Cheng Lin |
| collection | DOAJ |
| description |
The relationship between microbiome and cancer in the oral cavity has been under intense scrutiny over the past decade due to the advancement in next-generation sequencing. However, rapid accumulation of sequencing data may yield more questions than answers. Although such inconclusiveness can be attributed to the heterogeneous nature of biological phenomena, inconsistency in complex bioinformatics analysis may also play a role. In this review, we aim to provide a comprehensive and concise overview of common bioinformatics analysis processes used in microbiome studies focusing on 16S rDNA sequencing. By taking this bioinformatics perspective as a conceptual framework, we further discussed the consistency and discrepancies among numerous studies on the relationship between oral microbiome and oral cancer. This review aims to elucidate the bioinformatics methodologies and their impact on the current understanding of the oral microbiome's role in cancer development.
Keywords: Oral cavity, Bioinformatics, Microbiome |
| format | Article |
| id | doaj-art-0abcb9ab89b74cdeac41f83c4d309989 |
| institution | DOAJ |
| issn | 2277-3525 2582-7901 |
| language | English |
| publishDate | 2024-12-01 |
| publisher | International Dental Educationists’ Association (IDEA) |
| record_format | Article |
| series | Journal of Multidisciplinary Dental Research |
| spelling | doaj-art-0abcb9ab89b74cdeac41f83c4d3099892025-08-20T02:52:20ZengInternational Dental Educationists’ Association (IDEA)Journal of Multidisciplinary Dental Research2277-35252582-79012024-12-01102818610.38138/JMDR/v10i2.linMicrobiome and Cancer in the Oral Cavity: A Bioinformatics PerspectiveYu-Cheng LinDing-Han WangCheng-Chieh YangMing-Lun Hsu The relationship between microbiome and cancer in the oral cavity has been under intense scrutiny over the past decade due to the advancement in next-generation sequencing. However, rapid accumulation of sequencing data may yield more questions than answers. Although such inconclusiveness can be attributed to the heterogeneous nature of biological phenomena, inconsistency in complex bioinformatics analysis may also play a role. In this review, we aim to provide a comprehensive and concise overview of common bioinformatics analysis processes used in microbiome studies focusing on 16S rDNA sequencing. By taking this bioinformatics perspective as a conceptual framework, we further discussed the consistency and discrepancies among numerous studies on the relationship between oral microbiome and oral cancer. This review aims to elucidate the bioinformatics methodologies and their impact on the current understanding of the oral microbiome's role in cancer development. Keywords: Oral cavity, Bioinformatics, Microbiomehttps://jmdr-idea.com/articles/microbiome-and-cancer-in-the-oral-cavity-a-bioinformatics-perspective |
| spellingShingle | Yu-Cheng Lin Ding-Han Wang Cheng-Chieh Yang Ming-Lun Hsu Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective Journal of Multidisciplinary Dental Research |
| title | Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective |
| title_full | Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective |
| title_fullStr | Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective |
| title_full_unstemmed | Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective |
| title_short | Microbiome and Cancer in the Oral Cavity: A Bioinformatics Perspective |
| title_sort | microbiome and cancer in the oral cavity a bioinformatics perspective |
| url | https://jmdr-idea.com/articles/microbiome-and-cancer-in-the-oral-cavity-a-bioinformatics-perspective |
| work_keys_str_mv | AT yuchenglin microbiomeandcancerintheoralcavityabioinformaticsperspective AT dinghanwang microbiomeandcancerintheoralcavityabioinformaticsperspective AT chengchiehyang microbiomeandcancerintheoralcavityabioinformaticsperspective AT minglunhsu microbiomeandcancerintheoralcavityabioinformaticsperspective |