Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health

The holobiome is an interconnected network of microbial ecosystems spanning soil, plants, animals, humans, and the environment. Microbial interactions drive nutrient cycling, pathogen suppression, and climate regulation. Soil microbiomes facilitate carbon sequestration and enhance soil fertility, wh...

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Main Authors: Gissel García, Martha Carlin, Raul de Jesus Cano
Format: Article
Language:English
Published: MDPI AG 2025-02-01
Series:Microorganisms
Subjects:
Online Access:https://www.mdpi.com/2076-2607/13/3/514
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author Gissel García
Martha Carlin
Raul de Jesus Cano
author_facet Gissel García
Martha Carlin
Raul de Jesus Cano
author_sort Gissel García
collection DOAJ
description The holobiome is an interconnected network of microbial ecosystems spanning soil, plants, animals, humans, and the environment. Microbial interactions drive nutrient cycling, pathogen suppression, and climate regulation. Soil microbiomes facilitate carbon sequestration and enhance soil fertility, while marine microbiomes contribute to carbon capture and climate stability. However, industrial agriculture, extensive herbicide use, antibiotic overuse, and climate change threaten microbial diversity, leading to ecosystem and health disruptions. Probiotic interventions help to restore microbial balance. In human health, probiotics support gut microbiota diversity, reduce inflammation, and regulate metabolism. In agriculture, soil probiotics enhance microbial diversity, improve nutrient cycling, and degrade contaminants, increasing crop yields and soil health. Case studies show that microbial inoculants effectively remediate degraded soils and enhance nutrient uptake. Artificial intelligence is transforming microbiome research by enabling predictive modeling, precision probiotic design, and microbial consortia optimization. Interdisciplinary collaboration and supportive policies are essential for restoring microbial equilibria, ensuring ecosystem resilience, and promoting long-term sustainability. The integration of artificial intelligence, clinical research, and sustainable practices is crucial for advancing holobiome science. The holobiome framework underscores the need for interdisciplinary collaboration to address global challenges, bridging environmental sustainability, agriculture, and public health for a resilient future.
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spelling doaj-art-0aaaf0d4030443bebbff6b4403dcf9522025-08-20T02:10:24ZengMDPI AGMicroorganisms2076-26072025-02-0113351410.3390/microorganisms13030514Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One HealthGissel García0Martha Carlin1Raul de Jesus Cano2Pathology Department, Hospital Hermanos Ameijeiras, La Habana 10400, CubaThe BioCollective, LLC, Aurora, CO 80216, USABiological Sciences Department, California Polytechnic State University, San Luis Obispo, CA 93407, USAThe holobiome is an interconnected network of microbial ecosystems spanning soil, plants, animals, humans, and the environment. Microbial interactions drive nutrient cycling, pathogen suppression, and climate regulation. Soil microbiomes facilitate carbon sequestration and enhance soil fertility, while marine microbiomes contribute to carbon capture and climate stability. However, industrial agriculture, extensive herbicide use, antibiotic overuse, and climate change threaten microbial diversity, leading to ecosystem and health disruptions. Probiotic interventions help to restore microbial balance. In human health, probiotics support gut microbiota diversity, reduce inflammation, and regulate metabolism. In agriculture, soil probiotics enhance microbial diversity, improve nutrient cycling, and degrade contaminants, increasing crop yields and soil health. Case studies show that microbial inoculants effectively remediate degraded soils and enhance nutrient uptake. Artificial intelligence is transforming microbiome research by enabling predictive modeling, precision probiotic design, and microbial consortia optimization. Interdisciplinary collaboration and supportive policies are essential for restoring microbial equilibria, ensuring ecosystem resilience, and promoting long-term sustainability. The integration of artificial intelligence, clinical research, and sustainable practices is crucial for advancing holobiome science. The holobiome framework underscores the need for interdisciplinary collaboration to address global challenges, bridging environmental sustainability, agriculture, and public health for a resilient future.https://www.mdpi.com/2076-2607/13/3/514holobiomemicrobiomeprobioticssustainable agriculturesoil healthgut microbiota
spellingShingle Gissel García
Martha Carlin
Raul de Jesus Cano
Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health
Microorganisms
holobiome
microbiome
probiotics
sustainable agriculture
soil health
gut microbiota
title Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health
title_full Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health
title_fullStr Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health
title_full_unstemmed Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health
title_short Holobiome Harmony: Linking Environmental Sustainability, Agriculture, and Human Health for a Thriving Planet and One Health
title_sort holobiome harmony linking environmental sustainability agriculture and human health for a thriving planet and one health
topic holobiome
microbiome
probiotics
sustainable agriculture
soil health
gut microbiota
url https://www.mdpi.com/2076-2607/13/3/514
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AT marthacarlin holobiomeharmonylinkingenvironmentalsustainabilityagricultureandhumanhealthforathrivingplanetandonehealth
AT rauldejesuscano holobiomeharmonylinkingenvironmentalsustainabilityagricultureandhumanhealthforathrivingplanetandonehealth