Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape

Sclerotinia sclerotiorum is a soilborne and necrotrophic fungal pathogen that causes substantial yield and economic losses in oilseed rape cultivation worldwide. To date, no immune oilseed rape germplasm has been identified, posing a major challenge for breeding resistance to Sclerotinia stem rot. D...

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Main Authors: Nazanin Zamani-Noor, Malgorzata Jedryczka
Format: Article
Language:English
Published: Frontiers Media S.A. 2025-07-01
Series:Frontiers in Plant Science
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Online Access:https://www.frontiersin.org/articles/10.3389/fpls.2025.1610049/full
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author Nazanin Zamani-Noor
Malgorzata Jedryczka
author_facet Nazanin Zamani-Noor
Malgorzata Jedryczka
author_sort Nazanin Zamani-Noor
collection DOAJ
description Sclerotinia sclerotiorum is a soilborne and necrotrophic fungal pathogen that causes substantial yield and economic losses in oilseed rape cultivation worldwide. To date, no immune oilseed rape germplasm has been identified, posing a major challenge for breeding resistance to Sclerotinia stem rot. Developing reliable assessment techniques to evaluate oilseed rape resistance to the disease is a critical step in investigating genetic control and producing resistant cultivars. Extensive evaluations of oilseed rape genotypes have been conducted under both field and controlled conditions to assess resistance to Sclerotinia stem rot. Most inoculation techniques employ mycelium or mycelium-colonized substrates such as agar plugs, cereal grains, toothpicks, or petals. The use of ascospores as inoculum has been less common, despite their important role in the natural infection cycle. Several inoculation methodologies for controlled environments have been developed and evaluated for screening oilseed rape germplasm, including detached leaf/stem assays, intact leaf assays, cotyledon screening, as well as petiole and leaf axil inoculation. In parallel, several methods have been developed to assess Sclerotinia resistance under field conditions, such as intact stem inoculation at the flowering or maturity stage using S. sclerotiorum-infested toothpick, spraying ascospore suspensions onto plants, and spreading S. sclerotiorum-infested wheat grains. This review explores the suitability of various S. sclerotiorum inoculum types and evaluates the most common inoculation techniques for effective identification of susceptible and resistant oilseed rape genotypes to Sclerotinia stem rot.
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spelling doaj-art-077b1bea9b5843fd88e2d73c501c7e2f2025-08-20T03:12:42ZengFrontiers Media S.A.Frontiers in Plant Science1664-462X2025-07-011610.3389/fpls.2025.16100491610049Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rapeNazanin Zamani-Noor0Malgorzata Jedryczka1Julius Kühn-Institute (JKI), Institute for Plant Protection in Field Crops and Grassland, Braunschweig, GermanyPathogen Genetics and Plant Resistance Team, Institute of Plant Genetics, Polish Academy of Sciences, Poznań, PolandSclerotinia sclerotiorum is a soilborne and necrotrophic fungal pathogen that causes substantial yield and economic losses in oilseed rape cultivation worldwide. To date, no immune oilseed rape germplasm has been identified, posing a major challenge for breeding resistance to Sclerotinia stem rot. Developing reliable assessment techniques to evaluate oilseed rape resistance to the disease is a critical step in investigating genetic control and producing resistant cultivars. Extensive evaluations of oilseed rape genotypes have been conducted under both field and controlled conditions to assess resistance to Sclerotinia stem rot. Most inoculation techniques employ mycelium or mycelium-colonized substrates such as agar plugs, cereal grains, toothpicks, or petals. The use of ascospores as inoculum has been less common, despite their important role in the natural infection cycle. Several inoculation methodologies for controlled environments have been developed and evaluated for screening oilseed rape germplasm, including detached leaf/stem assays, intact leaf assays, cotyledon screening, as well as petiole and leaf axil inoculation. In parallel, several methods have been developed to assess Sclerotinia resistance under field conditions, such as intact stem inoculation at the flowering or maturity stage using S. sclerotiorum-infested toothpick, spraying ascospore suspensions onto plants, and spreading S. sclerotiorum-infested wheat grains. This review explores the suitability of various S. sclerotiorum inoculum types and evaluates the most common inoculation techniques for effective identification of susceptible and resistant oilseed rape genotypes to Sclerotinia stem rot.https://www.frontiersin.org/articles/10.3389/fpls.2025.1610049/fullBrassica napusSclerotinia sclerotiorumcotyledon inoculationintact stem inoculationdetached leaf assaydetached stem assay
spellingShingle Nazanin Zamani-Noor
Malgorzata Jedryczka
Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape
Frontiers in Plant Science
Brassica napus
Sclerotinia sclerotiorum
cotyledon inoculation
intact stem inoculation
detached leaf assay
detached stem assay
title Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape
title_full Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape
title_fullStr Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape
title_full_unstemmed Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape
title_short Inoculum and inoculation techniques: key steps in studying pathogenicity and resistance to Sclerotinia stem rot in oilseed rape
title_sort inoculum and inoculation techniques key steps in studying pathogenicity and resistance to sclerotinia stem rot in oilseed rape
topic Brassica napus
Sclerotinia sclerotiorum
cotyledon inoculation
intact stem inoculation
detached leaf assay
detached stem assay
url https://www.frontiersin.org/articles/10.3389/fpls.2025.1610049/full
work_keys_str_mv AT nazaninzamaninoor inoculumandinoculationtechniqueskeystepsinstudyingpathogenicityandresistancetosclerotiniastemrotinoilseedrape
AT malgorzatajedryczka inoculumandinoculationtechniqueskeystepsinstudyingpathogenicityandresistancetosclerotiniastemrotinoilseedrape