infinitylists: A Shiny application and R package for rapid generation of place‐based species checklists
Abstract Premise Biodiversity researchers often need to answer the question: “Which species of taxon X have been documented in (or near) spatial polygon Y?” Online databases with billions of occurrence records, including vouchered specimens and citizen science records, can provide the answer; howeve...
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| Main Authors: | , , , |
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| Format: | Article |
| Language: | English |
| Published: |
Wiley
2025-05-01
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| Series: | Applications in Plant Sciences |
| Subjects: | |
| Online Access: | https://doi.org/10.1002/aps3.70012 |
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| Summary: | Abstract Premise Biodiversity researchers often need to answer the question: “Which species of taxon X have been documented in (or near) spatial polygon Y?” Online databases with billions of occurrence records, including vouchered specimens and citizen science records, can provide the answer; however, quick spatial processing of huge biodiversity datasets can be difficult, and many general‐purpose tools are constrained by dataset size. Methods and Results infinitylists is a Shiny application and R package that allows users to generate species checklists for a user‐specified taxon and area. It downloads taxon–country datasets (e.g., Madagascan geckos) from biodiversity data providers and uses an open source, column‐oriented data file for fast retrieval and visualization. Available as a mobile‐friendly web tool with preloaded data, it can also be run locally in R for very flexible applications. Conclusions infinitylists is an easy‐to‐use tool with applications including supplementing survey data, planning collecting expeditions, and informing gap‐filling. infinitylists is a complementary tool to existing databases to help field ecologists and naturalists globally. |
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| ISSN: | 2168-0450 |