Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.

In seasonal transmission areas, clinical malaria occurs during the wet season when mosquitoes are present, while in the dry season, malaria transmission is interrupted and clinical cases are rare. In Mali, Plasmodium falciparum can persist in low parasitaemic asymptomatic individuals through the six...

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Main Authors: Sukai Ceesay, Martin Kampmann, Lasse Votborg-Novél, Helle Smedegaard Hansson, Rasmus Weisel Jensen, Manuela Carrasquilla, Hamidou Cisse, Louise Turner, Usama Dabbas, Christina Ntalla, Silke Bandermann, Safiatou Doumbo, Didier Doumtabe, Aissata Ongoiba, Kassoum Kayentao, Boubacar Traore, Peter D Crompton, Thomas Lavstsen, Silvia Portugal
Format: Article
Language:English
Published: Public Library of Science (PLoS) 2025-06-01
Series:PLoS Pathogens
Online Access:https://doi.org/10.1371/journal.ppat.1013210
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author Sukai Ceesay
Martin Kampmann
Lasse Votborg-Novél
Helle Smedegaard Hansson
Rasmus Weisel Jensen
Manuela Carrasquilla
Hamidou Cisse
Louise Turner
Usama Dabbas
Christina Ntalla
Silke Bandermann
Safiatou Doumbo
Didier Doumtabe
Aissata Ongoiba
Kassoum Kayentao
Boubacar Traore
Peter D Crompton
Thomas Lavstsen
Silvia Portugal
author_facet Sukai Ceesay
Martin Kampmann
Lasse Votborg-Novél
Helle Smedegaard Hansson
Rasmus Weisel Jensen
Manuela Carrasquilla
Hamidou Cisse
Louise Turner
Usama Dabbas
Christina Ntalla
Silke Bandermann
Safiatou Doumbo
Didier Doumtabe
Aissata Ongoiba
Kassoum Kayentao
Boubacar Traore
Peter D Crompton
Thomas Lavstsen
Silvia Portugal
author_sort Sukai Ceesay
collection DOAJ
description In seasonal transmission areas, clinical malaria occurs during the wet season when mosquitoes are present, while in the dry season, malaria transmission is interrupted and clinical cases are rare. In Mali, Plasmodium falciparum can persist in low parasitaemic asymptomatic individuals through the six-month dry season and shows circulation of more developed parasite stages compared to clinical malaria cases, indicative of reduced cytoadhesion of infected erythrocytes. How prolonged circulation of infected erythrocytes is achieved remains unknown. Here, we explored var gene expression in subclinical infections and clinical malaria cases of Malian children, collected during the dry and wet seasons. We sequenced expressed var DBLα-tags, used bioinformatic tools to predict their domain composition, binding phenotype and upstream sequence type; and determined their relationship to seasonality and clinical presentation. We found that parasites of asymptomatic infections expressed fewer var genes, with a larger proportion of var transcripts attributed to one or a few vars. In contrast, clinical cases exhibited expression of many var genes at lower proportions. We found that parasites of asymptomatic carriers expressed a mixture of CD36- and EPCR-binding PfEMP1, which changed over time. We confirmed that vars encoding CD36-binding PfEMP1 dominated in non-severe malaria cases, and found no significant difference in expressed var types between dry and wet seasons. Asymptomatic carriers were older, had higher titers of anti-P. falciparum antibodies, and broader reactivity to PfEMP1, suggesting that host immunity was the main determinant limiting var transcript variation in asymptomatic carriers. However, qRT-PCR analyses also indicated higher total var transcript levels in malaria cases compared to asymptomatic carriers, suggesting that in addition to the parasite's switching and the host's immune selection of expressed var genes, parasites able to sustain long-term infections may be poised for reduced PfEMP1 expression.
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publisher Public Library of Science (PLoS)
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spelling doaj-art-0422a7b5fe304454b53618eca30de87f2025-08-20T02:06:58ZengPublic Library of Science (PLoS)PLoS Pathogens1553-73661553-73742025-06-01216e101321010.1371/journal.ppat.1013210Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.Sukai CeesayMartin KampmannLasse Votborg-NovélHelle Smedegaard HanssonRasmus Weisel JensenManuela CarrasquillaHamidou CisseLouise TurnerUsama DabbasChristina NtallaSilke BandermannSafiatou DoumboDidier DoumtabeAissata OngoibaKassoum KayentaoBoubacar TraorePeter D CromptonThomas LavstsenSilvia PortugalIn seasonal transmission areas, clinical malaria occurs during the wet season when mosquitoes are present, while in the dry season, malaria transmission is interrupted and clinical cases are rare. In Mali, Plasmodium falciparum can persist in low parasitaemic asymptomatic individuals through the six-month dry season and shows circulation of more developed parasite stages compared to clinical malaria cases, indicative of reduced cytoadhesion of infected erythrocytes. How prolonged circulation of infected erythrocytes is achieved remains unknown. Here, we explored var gene expression in subclinical infections and clinical malaria cases of Malian children, collected during the dry and wet seasons. We sequenced expressed var DBLα-tags, used bioinformatic tools to predict their domain composition, binding phenotype and upstream sequence type; and determined their relationship to seasonality and clinical presentation. We found that parasites of asymptomatic infections expressed fewer var genes, with a larger proportion of var transcripts attributed to one or a few vars. In contrast, clinical cases exhibited expression of many var genes at lower proportions. We found that parasites of asymptomatic carriers expressed a mixture of CD36- and EPCR-binding PfEMP1, which changed over time. We confirmed that vars encoding CD36-binding PfEMP1 dominated in non-severe malaria cases, and found no significant difference in expressed var types between dry and wet seasons. Asymptomatic carriers were older, had higher titers of anti-P. falciparum antibodies, and broader reactivity to PfEMP1, suggesting that host immunity was the main determinant limiting var transcript variation in asymptomatic carriers. However, qRT-PCR analyses also indicated higher total var transcript levels in malaria cases compared to asymptomatic carriers, suggesting that in addition to the parasite's switching and the host's immune selection of expressed var genes, parasites able to sustain long-term infections may be poised for reduced PfEMP1 expression.https://doi.org/10.1371/journal.ppat.1013210
spellingShingle Sukai Ceesay
Martin Kampmann
Lasse Votborg-Novél
Helle Smedegaard Hansson
Rasmus Weisel Jensen
Manuela Carrasquilla
Hamidou Cisse
Louise Turner
Usama Dabbas
Christina Ntalla
Silke Bandermann
Safiatou Doumbo
Didier Doumtabe
Aissata Ongoiba
Kassoum Kayentao
Boubacar Traore
Peter D Crompton
Thomas Lavstsen
Silvia Portugal
Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.
PLoS Pathogens
title Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.
title_full Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.
title_fullStr Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.
title_full_unstemmed Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.
title_short Plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases.
title_sort plasmodium falciparum expresses fewer var genes at lower levels during asymptomatic dry season infections than clinical malaria cases
url https://doi.org/10.1371/journal.ppat.1013210
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