The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success

Mycorrhizal fungi are known to support their host plants by facilitating nutrient acquisition and enhancing resistance to biotic and abiotic stress. However, the possibility that they also convey structural information about the soil has not yet been tested. Here, we attempted to investigate whether...

Full description

Saved in:
Bibliographic Details
Main Authors: André Geremia Parise, Vinicius Henrique De Oliveira, Mark Tibbett, Brian John Pickles
Format: Article
Language:English
Published: Taylor & Francis Group 2025-12-01
Series:Plant Signaling & Behavior
Subjects:
Online Access:http://dx.doi.org/10.1080/15592324.2025.2527378
Tags: Add Tag
No Tags, Be the first to tag this record!
_version_ 1849429976147820544
author André Geremia Parise
Vinicius Henrique De Oliveira
Mark Tibbett
Brian John Pickles
author_facet André Geremia Parise
Vinicius Henrique De Oliveira
Mark Tibbett
Brian John Pickles
author_sort André Geremia Parise
collection DOAJ
description Mycorrhizal fungi are known to support their host plants by facilitating nutrient acquisition and enhancing resistance to biotic and abiotic stress. However, the possibility that they also convey structural information about the soil has not yet been tested. Here, we attempted to investigate whether ectomycorrhizal hyphae could guide root growth in response to physical obstacles by using Scots pine (Pinus sylvestris) and Suillus granulatus in a microcosm experiment fitted with U-shaped silicone mazes. Despite initial success in achieving ectomycorrhizal colonisation (88% of the inoculated seedlings), the fungi failed to produce the expected hyphal networks. Extensive and unexpected root growth rendered the system unsuitable for testing our hypothesis. Furthermore, structural issues with the microcosms compromised substrate integrity, possibly inhibiting fungal development. While our results were inconclusive, this report highlights challenges associated with replicating classical ectomycorrhizal experiments, underscoring the need for methodological refinement. We provide detailed recommendations and methodological clarifications that may aid future research. Although our initial hypothesis could not be tested, we argue that traditional microcosm experiments retain potential for advancing our understanding of mycorrhizal ecology, provided they are critically revisited and technically improved. Negative results, when well contextualised, are valuable contributions toward more robust and reproducible experimental frameworks.
format Article
id doaj-art-016ab80fc8a84e07893b8aa76a6a670f
institution Kabale University
issn 1559-2316
1559-2324
language English
publishDate 2025-12-01
publisher Taylor & Francis Group
record_format Article
series Plant Signaling & Behavior
spelling doaj-art-016ab80fc8a84e07893b8aa76a6a670f2025-08-20T03:28:10ZengTaylor & Francis GroupPlant Signaling & Behavior1559-23161559-23242025-12-0120110.1080/15592324.2025.25273782527378The pitfalls of ectomycorrhizal microcosms: lessons learnt for future successAndré Geremia Parise0Vinicius Henrique De Oliveira1Mark Tibbett2Brian John Pickles3University of ReadingUniversity of ReadingUniversity of ReadingUniversity of ReadingMycorrhizal fungi are known to support their host plants by facilitating nutrient acquisition and enhancing resistance to biotic and abiotic stress. However, the possibility that they also convey structural information about the soil has not yet been tested. Here, we attempted to investigate whether ectomycorrhizal hyphae could guide root growth in response to physical obstacles by using Scots pine (Pinus sylvestris) and Suillus granulatus in a microcosm experiment fitted with U-shaped silicone mazes. Despite initial success in achieving ectomycorrhizal colonisation (88% of the inoculated seedlings), the fungi failed to produce the expected hyphal networks. Extensive and unexpected root growth rendered the system unsuitable for testing our hypothesis. Furthermore, structural issues with the microcosms compromised substrate integrity, possibly inhibiting fungal development. While our results were inconclusive, this report highlights challenges associated with replicating classical ectomycorrhizal experiments, underscoring the need for methodological refinement. We provide detailed recommendations and methodological clarifications that may aid future research. Although our initial hypothesis could not be tested, we argue that traditional microcosm experiments retain potential for advancing our understanding of mycorrhizal ecology, provided they are critically revisited and technically improved. Negative results, when well contextualised, are valuable contributions toward more robust and reproducible experimental frameworks.http://dx.doi.org/10.1080/15592324.2025.2527378hyphaemazemicrocosmnegative resultspinus sylvestrisseedlingstructural informationsuillus granulatus
spellingShingle André Geremia Parise
Vinicius Henrique De Oliveira
Mark Tibbett
Brian John Pickles
The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success
Plant Signaling & Behavior
hyphae
maze
microcosm
negative results
pinus sylvestris
seedling
structural information
suillus granulatus
title The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success
title_full The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success
title_fullStr The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success
title_full_unstemmed The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success
title_short The pitfalls of ectomycorrhizal microcosms: lessons learnt for future success
title_sort pitfalls of ectomycorrhizal microcosms lessons learnt for future success
topic hyphae
maze
microcosm
negative results
pinus sylvestris
seedling
structural information
suillus granulatus
url http://dx.doi.org/10.1080/15592324.2025.2527378
work_keys_str_mv AT andregeremiaparise thepitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT viniciushenriquedeoliveira thepitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT marktibbett thepitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT brianjohnpickles thepitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT andregeremiaparise pitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT viniciushenriquedeoliveira pitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT marktibbett pitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess
AT brianjohnpickles pitfallsofectomycorrhizalmicrocosmslessonslearntforfuturesuccess