The next generation of transcription factor binding site prediction. by Anthony Mathelier, Wyeth W Wasserman

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Discovery and expansion of gene modules by seeking isolated groups in a random graph process. by Jochen Brumm, Elizabeth Conibear, Wyeth W Wasserman, Jennifer Bryan

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Validation of skeletal muscle cis-regulatory module predictions reveals nucleotide composition bias in functional enhancers. by Andrew T Kwon, Alice Yi Chou, David J Arenillas, Wyeth W Wasserman

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SAGE2Splice: unmapped SAGE tags reveal novel splice junctions. by Byron Yu-Lin Kuo, Ying Chen, Slavita Bohacec, Ojvind Johansson, Wyeth W Wasserman, Elizabeth M Simpson

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Gene characterization index: assessing the depth of gene annotation. by Danielle Kemmer, Raf M Podowski, Dimas Yusuf, Jochen Brumm, Warren Cheung, Claes Wahlestedt, Boris Lenhard, Wyeth W Wasserman

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In silico detection of sequence variations modifying transcriptional regulation. by Malin C Andersen, Pär G Engström, Stuart Lithwick, David Arenillas, Per Eriksson, Boris Lenhard, Wyeth W Wasserman, Jacob Odeberg

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