Bayesian Structure Learning and Sampling of Bayesian Networks with the R Package BiDAG by Polina Suter, Jack Kuipers, Giusi Moffa, Niko Beerenwinkel

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Viral quasispecies assembly via maximal clique enumeration. by Armin Töpfer, Tobias Marschall, Rowena A Bull, Fabio Luciani, Alexander Schönhuth, Niko Beerenwinkel

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Network-based clustering unveils interconnected landscapes of genomic and clinical features across myeloid malignancies by Fritz Bayer, Marco Roncador, Giusi Moffa, Kiyomi Morita, Koichi Takahashi, Niko Beerenwinkel, Jack Kuipers

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Inferring modulators of genetic interactions with epistatic nested effects models. by Martin Pirkl, Madeline Diekmann, Marlies van der Wees, Niko Beerenwinkel, Holger Fröhlich, Florian Markowetz

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Genetic progression and the waiting time to cancer. by Niko Beerenwinkel, Tibor Antal, David Dingli, Arne Traulsen, Kenneth W Kinzler, Victor E Velculescu, Bert Vogelstein, Martin A Nowak

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Estimated transmission dynamics of SARS-CoV-2 variants from wastewater are unbiased and robust to differential shedding by David Dreifuss, Jana S. Huisman, Johannes C. Rusch, Lea Caduff, Pravin Ganesanandamoorthy, Alexander J. Devaux, Charles Gan, Tanja Stadler, Tamar Kohn, Christoph Ort, Niko Beerenwinkel, Timothy R. Julian

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